Protein

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Genbank accession
AXC42670.1 [GenBank]
Protein name
DNA stabilizator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAVDFMYEGNQITCGDKSEALTGQLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
Physico‐chemical
properties
protein length:472 AA
molecular weight: 52237,40310 Da
isoelectric point:5,90247
aromaticity:0,10593
hydropathy:-0,22860

Domains

Domains [InterPro]
IPR021098
STR
4–472
IPR021098
AXC42670.1
1 472
Architecture
STR
STR 4-472
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC42670.1
1 472
Domain Start End Length (AA) Confidence
N-terminal 1 338 338 0,8293
Central domain 339 461 124 0,1673
C-terminal 462 472 10 0,9850
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-338
Central
339-461
C-terminal
462-472

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S149
[NCBI] 		2267250 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica serotype Typhimurium LT2
[NCBI] 		1457319 Ascomycota > Sordariomycetes > Xylariales > Xylariaceae > Lopadostoma >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC42670.1 [NCBI]
Genbank nucleotide accession
MH370387 [NCBI]
CDS location
range 31815 -> 33233
strand +
CDS
ATGCCGATTCAACAACTCCCCATGATGAAGGGAATGGGTAAAGACTTCAAGAATGCCGACTACATTGATTACCTACCAATCAATATGTTGGCCACACCGAAAGAAGTACTCAACTCATCGGGTTATTTACGCTCATTCCCGGGCATAGCGAAGCGCAACGATGTAAATGGAGTATCGCGCGGAGTTGAGTATAACACCGCTCAGAACGCTGTATATCGTGTTTGTGGCGGCAAGCTCTACAAAGGTGAAGCCGTAGTCGGTGATGTTGCCGGAAGCGGTCGCGTATCAATGGCACATGGTCGCACATCACAGGCGGTAGGCGTTAATGGTCAGCTCATCGAGTATCGCTATGATGGCGCGGTTAAAACCGTCTCAAACTGGCCTGCAGACAGCGGATTCACGCAGTATGAGTTAGGCTCAGTCCGTGACATTACTCGCTTACGTGGGCGTTATGCATGGTCAAAAGACGGTACAGATTCATGGTTTATCACTGACCTTGAAGATGAATCGCATCCTGACCGCTACAGTGCAGAATATCGCGCAGAATCGCAGCCTGACGGGATAATTGGCATAGGTTCATGGCGAGATTTCATCGTCTGCTTTGGCTCGTCGACGATAGAGTATTTCTCCCTGACAGGCGCAACCACCGTTGGCGCTGCGTTGTATGTCGCGCAGCCATCGTTAATGGTACAGAAGGGGATTGCCGGAACATACTGTAAAACGCCATTCGCTGATTCATATGCATTCATCAGTCACCCGGCTACTGGCGCACCTTCCGTCTACATCATCGGGTCAGGGCAGGCTTCACCAATTGCGACGGCCAGTATTGAGAAGATTATCCGCTCATACACAGCTGAAGAACTGGCGACTGGTGTAATGGAGACTTTGCGCTTCGATTCTCATGAGCTTCTGATTATTCATCTCCCTCGTCATGTTCTGGTTTACGACGCATCGTCAAGTCAGAACGGACCGCAATGGTGTGTGCTGAAAACAGGGCTTTACGATGATGTATATCGTGCTGTCGACTTCATGTATGAAGGCAACCAGATAACGTGCGGCGATAAATCAGAAGCGTTGACAGGACAATTGCAATTCGACATCAGCAGCCAATACGGACTACAGCAAGAACACCTGTTGTTTACCCCCCTCTTCAAAGCGGACAATGCCAGATGCTTCGACCTCGAAGTTGAATCATCCACTGGTGTTGCTCAATATGCTGACCGCCTGTTTCTGTCTGCAACCACGGACGGAATCAATTACGGTCGCGAACAGATGATTGAACAAAATGAGCCGTTTGTGTACGACAAGCGTGTTATCTGGAAACGTGTTGGGCGCATTCGTCGATTAATCGGATTCAAACTGCGGGTAATCACCAAATCACCAGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36b5633394c703e00a7fea767ad8253b91313c707092a752234592cf2e815a30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8562
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50