Protein

View in Explore
Genbank accession
QBX24691.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MLLSILDHNLERVGFLDNEDNAKGLVFYNDMWSRYLETGSATFDFTVDKKNLDLDTHNRRVYQTLNERSFVSFHDNGRAYLFNIMKTVEDEDAITCYCENLNLELLNEYANPYKADQAYSFEEYCKKLDLLDFAALKLGINEVSDQKRTIEWTGQDTKLKRLISLANNFDAEIAFETYLNDDSSLKVFRLNVFKEHDDKHQGVGVRRDDIILNYDQNIEKITRTVDKTPIFNMIHPTGSDKTITRQVTKTRTVYKTVTVSGGGAGNTENALRNIESRKGQRVGTGQCYSLSALYSALLGGPGLGAGVTGISGRIGAGIAASNIGTDYRWGAFGWAVVGNEVSNAKAGAIVNIRANYGSPFWTGPYGHTAIIKSVSGSTITVLEQNYAGRMYVVENSYNLGAYMAGVQTVCFPPEIAAGKTVGGQAVTKQVPVQEKYTENVKETVKTVIPSNKYKEYKNDAGEVEFYVKDGSIYAPISAKLYPSVLSGKEIGDNWIRKDASIETTDENVLEANALKMLRAGCYPMITYDVKGDADLEPGDTVKVHDDQFYTVLLLEMRASEVHRSFSDPDQGHSVFTNFKVLENQLPSDLLSRMEEMADAKAPYTIRLSSDNGTAFKNNEGETLFKADLYKGEKLVATDVSWRWALDGVVTVGMQYLVKAKDIDETAVLTVAGYVGNTEVATTEITLANLVEQIELKVMTSNGNTFKNGVIASTLTATLWRGNKEIDKDGTEFSYIWTKMNDDETPDEHWNADHSYSQKSIRITQEDVFRRATFSCEIEYIGKQV
Physico‐chemical
properties
protein length:784 AA
molecular weight: 87402,95000 Da
isoelectric point:5,09979
aromaticity:0,09694
hydropathy:-0,39452

Domains

Domains [InterPro]
DC_0558
ATT
1–400
DC_0558 DC_0977
G3DSA:3.90.1720.60
STR
207–411
G3DSA:3.90.1720.60
IPR007921
ENZ
262–413
IPR007921
IPR038765
STR
280–392
IPR038765
IPR007921
ENZ
282–385
IPR007921
DC_0921
STR
366–694
DC_0921
QBX24691.1
1 784
Architecture
ATT
STR
RBD
ATT 1-400 | STR 401-694 | RBD 695-780 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX24691.1
1 784
Domain Start End Length (AA) Confidence
N-terminal 1 259 259 0,8561
Central domain 260 462 204 0,6528
C-terminal 463 784 321 0,0021
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-259
Central
260-462
C-terminal
463-784

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan202
[NCBI] 		2548045 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equinus
[NCBI] 		1335 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24691.1 [NCBI]
Genbank nucleotide accession
MK448873.1 [NCBI]
CDS location
range 29518 -> 31872
strand +
CDS
ATGCTATTAAGCATTTTAGACCATAACCTTGAGCGTGTCGGATTTTTAGACAATGAAGACAATGCTAAAGGTCTTGTTTTTTATAACGATATGTGGTCGCGCTACCTTGAAACAGGTTCCGCGACTTTTGATTTTACGGTTGACAAAAAGAACCTTGATTTAGATACACACAACAGACGTGTCTATCAAACGCTTAACGAGCGTTCTTTTGTTTCGTTTCACGACAACGGCCGTGCTTACCTGTTTAACATCATGAAAACAGTTGAAGACGAAGACGCAATCACTTGTTATTGCGAGAACCTGAATCTTGAACTACTGAACGAATATGCAAATCCTTACAAGGCGGACCAAGCATACAGCTTTGAAGAATATTGCAAAAAGCTTGATTTGCTTGATTTTGCCGCTTTAAAACTCGGAATCAACGAAGTATCCGACCAGAAAAGAACCATTGAATGGACTGGGCAAGATACTAAATTAAAACGTTTGATTTCGTTAGCAAACAACTTTGACGCTGAAATTGCGTTTGAAACTTACTTGAACGACGATAGCTCTTTGAAAGTGTTTCGTCTGAATGTCTTTAAAGAGCACGATGACAAGCACCAAGGTGTCGGCGTAAGACGTGACGACATTATTTTGAATTATGACCAAAATATCGAAAAAATCACTCGTACGGTCGATAAAACGCCAATCTTTAATATGATTCACCCGACCGGAAGCGACAAGACTATCACGCGTCAAGTCACTAAAACTAGGACGGTTTACAAGACCGTTACGGTCTCTGGTGGTGGCGCAGGAAATACAGAGAACGCTCTACGAAACATCGAAAGTCGTAAAGGTCAACGAGTCGGAACTGGCCAATGTTATTCACTATCCGCCTTGTATTCTGCTTTGCTAGGTGGTCCCGGTCTTGGAGCTGGTGTCACTGGAATCAGTGGGCGAATCGGTGCAGGGATAGCCGCTTCGAATATTGGTACGGATTATCGTTGGGGCGCCTTTGGTTGGGCCGTTGTCGGAAACGAGGTTTCTAACGCAAAAGCCGGCGCTATCGTCAATATTAGAGCTAACTATGGTTCGCCTTTCTGGACTGGACCATACGGCCATACAGCGATTATTAAATCGGTCAGCGGCTCTACTATCACCGTTTTGGAACAAAACTACGCCGGTCGCATGTATGTAGTCGAAAATAGCTACAATCTAGGCGCTTATATGGCTGGTGTTCAGACAGTTTGTTTTCCGCCTGAAATCGCAGCAGGTAAGACGGTAGGCGGTCAAGCAGTCACTAAGCAGGTTCCCGTACAAGAAAAGTATACAGAGAACGTCAAAGAGACTGTTAAGACGGTTATTCCATCTAATAAGTATAAGGAATACAAGAACGACGCGGGAGAAGTTGAATTTTACGTCAAAGACGGAAGTATCTATGCTCCTATTTCCGCCAAGCTTTATCCGTCGGTTTTGTCTGGTAAAGAAATCGGCGATAACTGGATTAGGAAAGACGCGTCAATTGAAACGACTGACGAGAACGTCTTAGAAGCTAATGCTTTGAAAATGCTACGCGCTGGGTGCTATCCAATGATTACATACGACGTCAAAGGAGACGCCGATTTAGAGCCGGGAGATACGGTCAAAGTACATGATGACCAATTCTACACGGTTTTACTTTTGGAAATGAGAGCTTCAGAGGTTCACCGAAGCTTTTCAGACCCAGACCAAGGCCATTCGGTCTTCACTAACTTTAAAGTCCTTGAAAATCAGCTTCCTAGCGACTTGCTATCTCGTATGGAAGAAATGGCAGACGCCAAAGCACCTTACACAATCCGCTTATCGAGTGATAACGGTACGGCGTTTAAGAACAATGAGGGTGAGACGCTTTTTAAAGCCGACCTTTATAAGGGCGAGAAACTTGTCGCCACCGACGTCTCATGGCGCTGGGCGCTTGACGGCGTGGTAACAGTCGGTATGCAGTACTTAGTCAAAGCCAAAGACATAGACGAGACAGCAGTGCTAACCGTCGCTGGTTATGTCGGAAATACGGAAGTAGCCACGACGGAAATCACGTTGGCAAATCTAGTTGAGCAAATCGAGCTCAAAGTCATGACGTCAAACGGGAACACGTTCAAGAACGGCGTCATAGCAAGCACGCTGACAGCTACTTTGTGGCGTGGAAACAAGGAAATTGACAAGGACGGAACAGAGTTTAGTTACATCTGGACCAAAATGAATGACGATGAGACACCAGACGAACACTGGAACGCTGACCATTCATATTCACAAAAATCAATAAGAATCACGCAGGAAGACGTGTTCAGGCGAGCCACATTTTCTTGCGAAATCGAGTATATAGGCAAACAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50398d57a84653095f9ef27edaaa4126267ff73998b15f57c5d24168bce8cdd4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8637
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank