Protein

View in Explore
Genbank accession
WDR22435.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MRKTVLVLGLALASLSFASVAKDNNNNSRGDVTVVGDGTGSVHISQCASTWNCNNSELNVEFTGDVENVTINGEHTVIKGQNGKDGKDGIDGKDGANGKDGINGIDGAKGDKGDKGDTGASGKDGKDGLNGTNGTNGRDGIDGKDGAKGDTGAQGERGEQGIQGETGAAGLNGSDGKDGLNGENGKDGLNGTNGLDGAKGDKGDEGKQGIAGIAGLNGKDADMTQVNANTEANKSISKRQDAFEKSTNQRFANMDKRIDENRKNASAGIAGVAAMANIPQVSQNSSFSVGAGVGSYDSEQGLAVGMSARFNENVVTKASVAATTQDDFVFGAGVNYEW
Physico‐chemical
properties
protein length:338 AA
molecular weight: 34158,35930 Da
isoelectric point:4,72039
aromaticity:0,03550
hydropathy:-0,71538

Domains

Domains [InterPro]
DC_0989
ATT
1–85
DC_0989 IPR008160 IPR008160 G3DSA:3.30.1300.30
IPR050938
Unmapped
74–220
IPR050938 G3DSA:3.30.1300.30
IPR008160
STR
80–138
IPR008160 DC_2298 IPR005594
IPR045584
RBD
247–338
IPR045584
WDR22435.1
1 338
Architecture
ATT
STR
STR
RBD
ATT
ATT 1-85 | STR 86-138 | STR 161-265 | RBD 266-278 | ATT 279-338
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenP_UTK0001
[NCBI] 		3028910 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR22435.1 [NCBI]
Genbank nucleotide accession
OQ359891.1 [NCBI]
CDS location
range 10449 -> 11465
strand +
CDS
ATGCGTAAAACTGTATTAGTACTCGGCCTTGCACTGGCCTCTCTGTCTTTTGCTTCTGTAGCAAAGGATAACAATAACAACTCTCGTGGAGATGTTACTGTTGTTGGTGATGGAACTGGTTCAGTTCATATCAGTCAATGTGCCTCTACTTGGAATTGTAATAATTCCGAGTTAAATGTGGAGTTCACTGGTGATGTTGAAAACGTCACTATTAATGGTGAACACACTGTCATTAAAGGACAAAATGGCAAAGACGGAAAGGACGGTATCGATGGAAAAGATGGTGCTAACGGTAAGGATGGCATCAATGGTATCGACGGAGCCAAAGGTGACAAAGGCGATAAGGGAGATACTGGAGCATCTGGCAAGGATGGGAAGGACGGATTAAATGGGACCAACGGTACTAATGGTCGTGATGGTATTGACGGTAAGGATGGAGCCAAAGGAGATACTGGTGCTCAAGGTGAACGTGGTGAGCAAGGTATTCAAGGCGAAACAGGTGCTGCTGGTTTAAATGGTTCTGATGGTAAAGATGGTCTTAACGGTGAAAACGGGAAAGACGGTCTTAATGGAACTAATGGTTTAGACGGCGCTAAAGGAGATAAGGGTGATGAAGGCAAACAAGGTATTGCTGGAATCGCTGGGCTGAATGGTAAAGATGCAGATATGACTCAAGTCAATGCTAATACTGAAGCCAATAAATCTATTTCTAAGCGTCAGGATGCTTTTGAGAAATCCACCAATCAACGTTTTGCCAATATGGATAAACGTATTGATGAGAATCGTAAAAATGCATCTGCTGGTATTGCAGGCGTAGCTGCTATGGCTAACATTCCACAGGTAAGCCAGAATAGTTCATTCTCGGTTGGTGCTGGCGTTGGCTCATACGATAGTGAACAAGGTCTTGCTGTTGGTATGAGTGCCCGTTTTAACGAAAATGTAGTAACCAAAGCTTCAGTAGCTGCTACTACTCAAGATGATTTCGTCTTTGGTGCTGGTGTAAACTACGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
419331bd7e3c734bc2a4c8c5e44b23f8d3eecc53f6731a8d643e889e0ee6b479
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6340
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank