Protein

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Genbank accession
CAH9016630.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDLDNAIKSINESAVKAENTAGFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDVLFAAAESDINQAVSDASQSATDAQDAADSIGRYQGLWPDTGGSALKGDTYQTQAGGTETGQYFTALQNTAADPVGDDVNWREVISSGSFSQYTDIAIKPSGSKSSIDVMLEGFNSNPLMHAIGTYIKTGGTTFEYIDSTGPITLENFRALNSVSVSDFGAKGYGNDDTDALNNALQAKRYLEDRARDGGVVLFFPDRNYRITDSLNVVNFASSMVAETGGIFGGVTITMDAGINKPVLNINDPSAANNPANVSGFKASNIKFDGGGRTTNPILIKAGNDLAVGVDIDAEFDNCKFYGAETAIECWGRGLNVHHCLFATINEAGVAPKWPSGYLPDTDPDQTPEGGFRAIYVEHNRVHASSGHLVRSDSILNSENLQIVICENHIDTFAGLFYGSCINSKIDNNHVINASNVRVIDAFTMVKTSISRNEACGANGSNDWNIQSFFVANPTSVIKHLTMDSNVISQVNKEVFRMDGDWSYVKIRDNTFVDVTLDNALGLANYPIVRILSDGPRLTFKGNTVDIPDMTNKPPLVYLTGRAPQNNPGWIIKDNDIPDYLTDTDQLPYTFGDASGDFGTYTGDGSATQVIPTNITGRGVVVSIRGGANVGQTYTALSGTSQAGPGVLWTGNELTASGDYNENGVTYTFMIIQ
Physico‐chemical
properties
protein length:706 AA
molecular weight: 75576,38430 Da
isoelectric point:4,46194
aromaticity:0,08499
hydropathy:-0,28824

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil IPR012334
DC_0090
STR
1–650
DC_0090
IPR011050
STR
224–578
IPR011050
CAH9016630.1
1 706
Architecture
STR
STR 1-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH9016630.1
1 706
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,9930
Central domain 227 623 398 0,9923
C-terminal 624 706 82 0,9741
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-623
C-terminal
624-706

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 120E34-1
[NCBI] 		2963164 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH9016630.1 [NCBI]
Genbank nucleotide accession
OX241575.1 [NCBI]
CDS location
range 29547 -> 31667
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAAATCAATTAACGAGTCGGCAGTAAAGGCAGAAAATACCGCTGGCTTTCTGGATGATATGTCGACGTTTGACGATCAATCAAGCGTAACCAATCCAAACAACGGTCAAACTGTTGCGTCTATTCCTAAGCAAGTAAAAGATCGCACAGATGTTTTGTTTGCTGCTGCTGAGTCCGATATTAATCAAGCTGTGTCTGACGCATCACAAAGCGCAACAGATGCACAAGATGCCGCAGATAGCATTGGTCGCTATCAAGGTTTATGGCCTGATACTGGAGGTAGTGCATTAAAGGGTGACACATATCAAACCCAAGCAGGCGGAACTGAAACAGGTCAATACTTTACAGCCCTGCAAAATACAGCGGCCGATCCTGTTGGTGATGATGTGAATTGGCGTGAGGTTATTAGTTCTGGAAGTTTCTCGCAATACACGGATATAGCTATTAAGCCATCCGGTAGTAAGTCGTCAATTGATGTAATGCTTGAGGGGTTTAACTCAAATCCTCTCATGCATGCTATAGGCACATATATAAAAACAGGCGGCACAACATTTGAATACATAGATTCTACTGGGCCTATAACACTGGAAAACTTCAGGGCATTGAACTCCGTTTCTGTTTCCGACTTTGGTGCTAAAGGTTACGGAAACGATGACACAGACGCGTTAAATAATGCTCTGCAAGCAAAAAGATACCTAGAAGATAGAGCTAGAGATGGTGGTGTAGTACTTTTCTTTCCTGACCGAAATTACAGAATCACAGACTCATTAAACGTTGTTAACTTTGCCAGCTCAATGGTTGCTGAGACTGGTGGGATTTTCGGTGGCGTAACTATAACAATGGACGCTGGAATTAATAAGCCAGTGCTTAATATAAATGACCCTTCAGCGGCCAACAACCCAGCTAACGTTAGCGGATTTAAAGCCAGCAACATCAAATTCGACGGAGGGGGAAGAACAACAAACCCAATTTTGATAAAAGCAGGTAACGATCTAGCTGTAGGCGTTGACATTGATGCTGAGTTTGATAACTGCAAGTTTTACGGAGCTGAGACAGCTATAGAGTGTTGGGGTCGAGGTCTTAACGTTCACCATTGCCTTTTTGCAACAATAAATGAGGCGGGAGTTGCGCCTAAATGGCCGTCAGGTTATTTACCTGATACAGACCCAGACCAGACTCCAGAGGGAGGGTTTAGAGCAATATATGTTGAACATAACAGAGTTCACGCATCCTCTGGTCACTTAGTTAGGTCAGACTCTATTTTAAACTCCGAAAACCTTCAGATTGTAATTTGTGAAAACCATATAGACACCTTCGCGGGTCTTTTTTACGGTTCTTGTATAAACAGTAAGATTGACAATAACCATGTAATAAACGCAAGCAACGTAAGAGTAATCGACGCTTTTACAATGGTTAAGACTTCGATTAGTCGGAATGAGGCTTGCGGAGCGAACGGGAGTAATGATTGGAATATACAATCTTTCTTTGTAGCAAACCCAACCTCTGTAATAAAGCACCTAACAATGGACTCGAATGTAATATCTCAGGTTAACAAAGAGGTGTTCAGAATGGATGGTGATTGGTCTTACGTTAAAATCAGAGATAACACTTTTGTGGATGTAACTCTTGATAACGCCCTTGGTTTAGCCAACTACCCTATAGTTAGGATTTTATCAGACGGGCCAAGGCTTACATTTAAGGGTAACACTGTTGATATACCTGACATGACAAACAAGCCGCCTCTCGTTTATTTGACTGGTAGGGCTCCGCAAAATAACCCAGGATGGATAATAAAGGATAATGACATCCCAGACTATCTAACGGATACAGACCAATTGCCTTACACTTTCGGGGATGCGAGTGGTGATTTTGGCACTTACACAGGTGACGGAAGTGCAACGCAAGTTATACCAACAAATATAACCGGTAGAGGTGTTGTTGTGTCGATAAGGGGTGGTGCAAATGTTGGGCAAACTTACACGGCGCTATCTGGAACATCCCAGGCAGGCCCAGGCGTTCTATGGACTGGTAATGAGTTGACAGCTTCAGGGGATTATAATGAAAACGGTGTTACATATACATTTATGATAATCCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf49b7d8be67f820df1c58465d6502fbbfb1d06158267cbac5651d9c38e529ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7770
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50