Protein

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Genbank accession
USW22289.1 [GenBank]
Protein name
head portal protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPEGITDGDTRVSDITGTSVAVYSPYTSPNNTSAPQVMVGDPIEQGLYITVESNEVDGVVLKAQNGLGISFSYMSGYPSLSGSTGTIYDPSGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVISVSEGTVTFVVPGNLISKWQQIQPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGRSKTLASVTAEIQYQLLDENSVPYGQIYTAQGTVSGRTSDYNGVTIYADLPVASRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMSPNTQAVQSLIRLARDPDVGGLDLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVNTIADAIFCTPYRRGADILLDFERPRIGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNTKEVITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNTLKKISVSFSATEEGIFALPNRAVSVVKGSRMSTYDGYITAVNGLTVELSQPVKFTSGDDHSLVLKRRDGGVQSVKVTPGAHDRQVIMAEVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:756 AA
molecular weight: 83356,71120 Da
isoelectric point:5,28594
aromaticity:0,09921
hydropathy:-0,45146

Domains

Domains [InterPro]
DC_0118
STR
1–590
DC_0118 DC_0808
NF040662
Unmapped
256–736
NF040662
USW22289.1
1 756
Architecture
STR
RBD
STR 1-590 | RBD 607-750 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USW22289.1
1 756
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,9055
Central domain 120 318 200 0,7435
C-terminal 319 756 437 0,1246
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-318
C-terminal
319-756

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PSP2-22
[NCBI] 		2961714 Viruses >
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USW22289.1 [NCBI]
Genbank nucleotide accession
ON886116 [NCBI]
CDS location
range 13001 -> 15271
strand -
CDS
GTGAAAGGGGCGTCATCTAACCTTGCGAACTCCCAAGCAGATTCGCCAAACAACAGTCTCACCGACCGTAACAACAAGGCCCGCCCATACGAGCGCAGCTACGACATCTGCGGAACGGTGCAAACTATCCCAAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGTGGTTACCTAGACATACACCCTGAAGGTATAACTGACGGGGACACCCGCGTATCAGACATAACAGGCACGTCGGTTGCCGTGTACTCACCATATACATCGCCCAATAACACATCGGCGCCCCAGGTCATGGTCGGCGACCCTATAGAGCAGGGCCTGTACATTACCGTAGAATCTAACGAAGTAGATGGCGTGGTTCTGAAAGCACAAAACGGACTTGGCATCTCGTTTTCTTACATGTCGGGATACCCTTCGTTATCCGGTTCCACCGGCACGATATACGACCCGTCAGGAGGGTCTGACTTCTCCGGTGTTCTTGTGCCGAATGATACGTTTTCTCTCGTATCCGCCTGGACAAATACAGATGTTGACCTTTCCGGTGGCGGATATCAGGTAATAAGTGTTTCCGAAGGAACTGTTACTTTCGTAGTCCCCGGTAATCTTATAAGTAAATGGCAACAAATACAGCCAGGTTCATTTTTCCGGGGAGATGGTGAAGCATCATTGCAACCAGACAACACCTATGAAAAAACGTTAACTGATTGGGTGTCCATAAACCGAACTGAGGTGGAACGTATTGTCGCTAACATAGCTGCTGCAAACGGGATGTACAAAGACAATGGTAGGTCTAAAACGTTGGCTTCGGTAACGGCTGAAATACAATACCAACTTCTTGACGAAAATAGCGTACCTTACGGCCAAATTTACACGGCGCAAGGAACCGTATCCGGGCGCACTTCTGACTATAACGGGGTGACTATATACGCAGATTTACCAGTAGCATCTCGTGTTCGCGTTAGGGCGAGAAGGGTAACAGACCTTGATTTCAATTTCGAAGGCTCAGTGGTAGACGAAATAACCTACGTTAACCTGTACGGGCAGACTCGCGACAACACCCCGCACTACGGCAACCGAACCACTGTGCACTCAATGCGTAAGCAGACACCGCGGGCTGCCGAAGTTAAGCAACCTCAGTTGCGCATGATTGCGACCGAGATGGTGTATAAATATCTCGGGAATGGAGTGTTTGAGGATACGATGTCACCTAACACCCAAGCAGTTCAATCGTTGATTCGCCTCGCCAGGGACCCGGACGTCGGGGGGCTTGACTTAACAGTAAGGAATATGGATAAGTTGCTTGCTGTTCAAAAGGAAATAGAGGACTACTTCGGCGACAAGCAAGCAGGAGAATTCTGTTACACCTTTGACGATTATAAAACAACAATGCAGGATATCGTCAACACTATTGCCGATGCTATTTTTTGCACGCCATACCGTAGAGGCGCTGACATTCTGCTTGACTTCGAGAGGCCTCGTATTGGGCCTGAAATGGTATTTACCCACCGCAGCAAGGCGGGAACCTCCGAAAAATGGACAAGAACTTTCAATGATGCACAGGTTTTTGACAGTTTAAAATTCTCTTACATAGACCCAAAAACTAACACTAAAGAGGTGATAACAATCCCTGAAACTGGCGGTTTGAAGACTGAAACATACGATTCGAAGGGGATACGCAACTATAAGCAGGCTTTCTGGGCCGCAAACAGACGACACCAGAAAAACACTCTTAAGAAGATTTCGGTATCGTTTAGTGCCACGGAAGAGGGGATATTTGCGCTACCAAACAGGGCTGTTAGCGTAGTGAAAGGCTCCCGGATGTCTACCTATGACGGCTACATAACGGCGGTAAACGGCCTCACTGTGGAGCTGTCACAGCCTGTTAAATTTACATCCGGAGACGACCACTCTCTTGTTCTCAAGCGGCGAGATGGTGGCGTCCAAAGCGTCAAAGTCACACCAGGTGCGCACGACAGGCAGGTGATTATGGCGGAAGTCCCCCAAGAGGCAATATACACCGGCAACAGCGCTTTAAAAACTGAGTTTTCATTTGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGATCCTGGCGACGACCGAACAGTTAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCTAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
723f229ba616ea8757b9741b9fb1b655e3a47451b2fa5d6cebff8c15a7a2361e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8462
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50