Protein

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Genbank accession
WKC56426.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKQVGTMASMIHGVSEQEPHNRQPGKMWESINMFDSPTRGKVRRRGTEYKHHKALPSAVASALVDAKSMQEYTFFIDGYEYSLIYSAKGTTKDYFAQLVSKDSDEFFDIVYEDSTWVDNLIGGGVSAIAALGRYVYIAGNTTIPRATSTDLWDTPANLQKLSGWIREGAYSRKFTAQLTKTDGTKVEYSYTTKPAAYPELLDTTDISFWKDGNADPKEPRPDYQKDVNDAVNAYEGKKSAWIKEAAEDIVPANIARKIAELIVADGYLASGLESCVVIDDPAFVDIKMLDDGNGSLVSYAGKEVNDPQFVTLYHWAGKIVRVRPSGGGDKESYYLKAEPLDGGTGWTKVQWVEAAGVEHEIHNVVSQLVIDRNLKTAYVAQDGDGLKSLAPQLGDHPIYKKNAVGDGVTAPLPYFFGRKISCMTVFQDRLTITSDNMVNMSRSSDYLNFFRATVLNIQDNDPVEVFAHGSEGDVIERAVMYDKSLILFGRLRQYAVDGRTFFSPTNPALNVIGNYEGGSVAQPVASGNFLFFGKHARKRTGLHQMRPGDTPETTVVYEVSQELDTWLRGKPVQLLGTTQPDMITFRTDASPSIWYLYKYADQDGVGRVMSSWGKFQYADELGTVAGITHHQGDLLIITLRSAGGKDYWFLDRLELDSDLDSKPHLDSQVPYGQETPWHTAVADKLFAAATNESEYFLLGSPRVGAEDFIEQAPGVESALVVGSVSPASFQITNPYMRDSNGMPILAAKLQLVTYSFHLADTGGFRAYVLRPDPQRTMWFEGRVIGHTSNIIGRQPVFTGARSVSVGKETRACIVELRSEDWQPLRVTGAEWSGQSFMPRARGMY
Physico‐chemical
properties
protein length:845 AA
molecular weight: 93642,15480 Da
isoelectric point:5,46930
aromaticity:0,10651
hydropathy:-0,34757

Domains

Domains [InterPro]
DC_0058
STR
1–845
DC_0058
IPR058003
TTP
234–843
IPR058003
WKC56426.1
1 845
Architecture
STR
STR 1-845
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKC56426.1
1 845
Domain Start End Length (AA) Confidence
N-terminal 1 188 188 0,8645
Central domain 189 399 212 0,2998
C-terminal 400 845 445 0,3733
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-188
Central
189-399
C-terminal
400-845

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage c9-N
[NCBI] 		3058994 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKC56426.1 [NCBI]
Genbank nucleotide accession
OR209256 [NCBI]
CDS location
range 18645 -> 21182
strand +
CDS
ATGGCCAAGCAAGTTGGCACGATGGCTTCGATGATCCACGGCGTCTCGGAGCAAGAGCCGCACAACCGTCAGCCCGGAAAGATGTGGGAGTCGATCAACATGTTCGACAGCCCGACCCGTGGCAAGGTACGCCGTCGCGGCACCGAGTACAAGCACCACAAGGCGCTGCCGTCTGCCGTTGCTTCGGCCCTCGTGGATGCCAAGAGCATGCAGGAGTACACGTTCTTCATCGACGGTTACGAGTACAGCCTGATCTACAGCGCCAAGGGAACTACCAAGGACTACTTCGCGCAGCTGGTCAGTAAGGACAGCGACGAGTTCTTCGACATCGTGTACGAAGACAGCACGTGGGTGGACAACCTGATCGGCGGCGGCGTGTCCGCAATCGCTGCGCTGGGTCGCTACGTGTACATCGCTGGTAACACCACAATCCCGCGTGCCACCAGCACGGACCTGTGGGACACTCCCGCGAACCTTCAGAAGCTCAGCGGTTGGATTCGTGAGGGCGCGTACAGCCGGAAGTTCACCGCGCAGCTTACCAAGACGGACGGCACGAAGGTGGAGTACAGCTACACCACGAAGCCCGCCGCGTACCCGGAACTGTTGGACACCACGGACATCTCGTTCTGGAAGGACGGTAACGCCGACCCGAAGGAACCGCGCCCGGATTACCAGAAGGATGTGAACGACGCGGTGAACGCGTACGAAGGTAAGAAGTCCGCGTGGATCAAGGAGGCTGCGGAGGACATCGTTCCCGCGAACATCGCCCGAAAGATCGCCGAACTGATCGTGGCCGATGGGTACCTCGCATCCGGTCTGGAATCCTGCGTGGTCATTGACGATCCCGCGTTCGTGGACATCAAGATGCTGGACGACGGTAACGGCTCCCTCGTATCGTACGCAGGCAAGGAAGTGAACGACCCGCAGTTCGTCACGCTGTACCACTGGGCAGGCAAGATCGTCCGCGTGCGTCCGAGCGGTGGCGGCGACAAGGAATCGTACTACCTGAAGGCGGAGCCGCTGGACGGTGGCACGGGCTGGACGAAGGTACAGTGGGTGGAGGCCGCAGGCGTTGAGCATGAGATTCACAACGTCGTCTCGCAGTTGGTCATCGACCGGAACCTGAAGACCGCGTACGTGGCGCAGGACGGTGACGGCCTGAAGTCCCTCGCACCGCAGCTGGGTGACCATCCGATCTACAAGAAGAACGCGGTAGGCGATGGCGTCACTGCGCCGCTGCCGTACTTCTTCGGTCGCAAGATCAGCTGCATGACGGTGTTTCAGGATCGACTCACCATCACTTCGGACAACATGGTGAACATGTCACGCTCCTCGGACTACCTGAACTTCTTCCGGGCAACCGTGCTGAACATTCAGGACAACGATCCGGTAGAGGTGTTCGCACATGGCTCCGAAGGTGACGTGATCGAGCGCGCTGTGATGTACGACAAGAGCCTGATCCTGTTCGGACGCCTGCGTCAGTACGCCGTGGACGGTCGCACGTTCTTCTCTCCGACGAACCCCGCACTGAACGTGATCGGGAACTACGAGGGAGGTAGCGTGGCGCAGCCTGTGGCTTCGGGTAACTTCCTGTTCTTCGGGAAGCATGCACGTAAGCGTACGGGCCTGCACCAGATGCGCCCCGGCGACACGCCGGAGACGACTGTGGTGTACGAGGTGTCGCAGGAACTGGACACGTGGCTGCGTGGCAAGCCGGTGCAGCTGCTGGGTACGACGCAGCCGGACATGATTACCTTCCGCACGGACGCAAGCCCGTCGATTTGGTACCTGTATAAGTACGCAGATCAGGATGGAGTTGGTCGCGTAATGTCCAGCTGGGGCAAGTTCCAGTACGCCGATGAACTCGGTACCGTTGCTGGTATCACTCATCACCAAGGCGACCTTCTCATCATCACTCTCCGCAGTGCCGGTGGTAAGGACTACTGGTTCCTTGACCGACTGGAACTGGACAGCGATCTGGATTCCAAACCGCATCTGGATTCGCAGGTACCGTACGGTCAGGAGACTCCGTGGCATACCGCCGTGGCTGACAAGCTGTTCGCAGCAGCTACCAACGAGAGCGAGTACTTCTTGCTCGGCTCGCCACGCGTAGGTGCAGAAGACTTCATTGAGCAGGCACCCGGCGTCGAGTCCGCGTTGGTCGTCGGTAGCGTCAGCCCGGCGTCCTTCCAGATCACGAACCCGTACATGCGGGACAGCAACGGCATGCCTATCCTCGCCGCGAAGTTGCAGCTGGTTACCTACAGCTTCCACCTTGCGGACACTGGTGGCTTCCGTGCGTACGTTCTGCGGCCCGATCCGCAGCGTACCATGTGGTTTGAGGGACGTGTCATCGGACACACCAGCAACATCATCGGTCGTCAGCCTGTGTTCACGGGCGCACGATCCGTAAGCGTAGGCAAGGAAACCCGTGCCTGCATTGTCGAACTGCGGTCGGAAGACTGGCAGCCGCTTCGCGTCACTGGCGCTGAGTGGTCCGGTCAGTCCTTCATGCCGCGCGCACGAGGAATGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
77d7f2569ef197e70b51b8fa56101ea76db0beb0162f77a3665b451af37e2356
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3051
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50