Protein

View in Explore
Genbank accession
QPI13750.1 [GenBank]
Protein name
putative tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLEDLQTAKKHQLFEAEVITGLSGGVAGGANIDYSTNAVTGQVQKTMPAILRDIGFRPASFDFNTGGTIGVNDRDLAVLWPAPGGDNDWYYWEGALPKVVPASSSPLTTGGIADGAWRPVGDITLRGDLAAGTGASMIGFDSTTVAAELIKLNRRAEFVTPEEYGAIGDGVADDTAAWNSAVATGKDVHAKPGAVYKISSSIILPYGTKPQNIFGNNATISSTGIFITFRQRLADNSVVDNTSMKNFFEVVAQGIASEKSIYTAVNGLQFLRISNGMAVNCTAKGFCDSLSAMGNARVFNFTADNIRNAAVRGEGDNNIVVGVKVGWAAGDVIVIKSNYSYYANLYCKYAGIAPADSLEPPSLQDQGAMVTFAQDGINATYNTVENVTCSFYGAGFAVFSGSYNKVTGYCYGGVWSEATRLKGFANAIYMAGTRNSIGNVLFDLVGTGVEMHGGSDSCFIGRITILQKSGFGVYCLSTNGTTTNCYIDGLHVRGGAQKTNDLYIASDGTSIGEIIIDNVTGPVSGGTPGWVGAACKIRRLEFNSSPSSTSGLINVTIGAPATIGELSISNCLGTSLIINDNILPVIDRILIKPRPTATSRPINMISSNGAAVRYVGAITINPAPAAPRLNGDLYIGYYLGPAWLKDNAAVNAAVKYPEPVNHVL
Physico‐chemical
properties
protein length:673 AA
molecular weight: 70505,65060 Da
isoelectric point:5,33840
aromaticity:0,08767
hydropathy:0,06701

Domains

Domains [InterPro]
DC_1953
STR
1–664
DC_1953
G3DSA:2.10.10.80
ATT
66–141
G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
86–131
IPR040775 IPR011050
QPI13750.1
1 673
Architecture
STR
ATT
STR
STR 1-65 | ATT 66-141 | STR 142-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI13750.1
1 673
Domain Start End Length (AA) Confidence
N-terminal 1 181 181 0,9859
Central domain 182 614 434 0,9947
C-terminal 615 673 58 0,9667
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-181
Central
182-614
C-terminal
615-673

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Tsm2
[NCBI] 		2787014 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI13750.1 [NCBI]
Genbank nucleotide accession
MW082583 [NCBI]
CDS location
range 34032 -> 36053
strand +
CDS
ATGTCTAGCGGCTGCGGTGATGTTTTGTCACTCGAAGATCTGCAAACTGCAAAAAAGCATCAGCTTTTCGAGGCTGAGGTGATCACTGGGTTGTCGGGGGGCGTCGCGGGCGGCGCCAATATCGACTACTCCACCAACGCGGTTACCGGGCAAGTGCAGAAAACAATGCCGGCCATCCTGCGCGATATCGGCTTCCGCCCCGCGTCGTTCGACTTTAATACCGGCGGCACTATCGGGGTTAATGACCGCGACTTGGCGGTTCTCTGGCCCGCGCCTGGCGGGGACAATGATTGGTATTATTGGGAAGGTGCGCTGCCGAAGGTTGTCCCAGCGTCGTCCTCTCCGCTGACCACCGGGGGCATTGCCGATGGTGCGTGGCGCCCTGTGGGCGATATTACTCTGCGCGGCGATCTGGCCGCCGGGACTGGCGCTTCTATGATCGGGTTCGATAGCACTACGGTAGCGGCGGAGCTGATTAAACTTAATCGTCGCGCGGAGTTCGTGACCCCGGAGGAGTACGGCGCTATTGGGGACGGCGTCGCCGATGACACCGCAGCCTGGAATAGTGCAGTCGCCACGGGCAAAGACGTCCATGCCAAGCCAGGCGCAGTGTATAAAATTTCATCGTCTATTATTCTGCCGTATGGCACAAAGCCGCAGAACATTTTTGGCAATAACGCCACGATCTCCAGCACCGGTATTTTCATCACATTCCGGCAGCGCCTGGCGGATAACTCAGTGGTAGACAACACCTCCATGAAAAACTTCTTCGAGGTGGTAGCCCAGGGTATCGCATCTGAAAAGTCGATCTATACCGCGGTAAACGGGCTGCAGTTTTTACGGATCAGTAACGGCATGGCAGTTAACTGCACGGCTAAAGGTTTCTGCGATTCGTTATCTGCGATGGGTAATGCTCGAGTTTTCAACTTCACCGCAGACAATATCCGCAACGCGGCGGTTCGTGGTGAAGGCGATAATAATATTGTGGTCGGGGTTAAAGTAGGCTGGGCGGCTGGCGACGTAATCGTGATCAAGAGCAATTACTCATATTATGCGAACTTGTACTGCAAATATGCAGGCATTGCCCCGGCGGATAGCCTGGAACCGCCATCACTGCAAGATCAGGGGGCAATGGTCACTTTCGCCCAAGATGGTATTAATGCTACCTACAACACGGTTGAAAATGTAACGTGCTCGTTTTATGGCGCCGGGTTCGCTGTATTCTCGGGTTCGTATAACAAAGTTACCGGTTATTGCTACGGCGGCGTATGGAGCGAGGCGACGCGCCTTAAAGGGTTCGCCAACGCTATTTATATGGCCGGCACCCGAAATTCCATTGGAAATGTGCTTTTCGACCTTGTTGGTACTGGTGTTGAAATGCATGGCGGGTCGGACAGTTGCTTCATCGGCCGTATCACCATCCTGCAAAAAAGCGGGTTTGGCGTGTACTGCTTAAGCACGAACGGCACTACAACAAACTGCTATATCGACGGCCTGCACGTCCGTGGCGGGGCGCAGAAAACAAATGATCTGTATATAGCATCCGACGGAACCAGCATTGGCGAGATAATTATCGATAACGTTACCGGCCCTGTGTCTGGCGGCACACCCGGCTGGGTCGGTGCTGCATGCAAGATCCGCCGATTGGAGTTTAATTCCAGCCCTTCTTCGACGTCTGGATTGATCAATGTCACCATTGGGGCACCTGCGACGATCGGCGAGCTTTCCATTTCAAACTGCTTGGGGACTTCGCTGATAATCAATGATAATATCCTCCCGGTTATTGATCGTATCCTGATTAAGCCAAGACCAACGGCTACATCTCGACCGATCAACATGATCAGCTCTAATGGCGCTGCCGTTCGTTATGTGGGGGCTATTACTATTAATCCCGCGCCGGCGGCACCGCGACTTAACGGTGATTTGTATATTGGCTATTACCTCGGCCCTGCTTGGCTGAAAGATAATGCAGCCGTAAACGCCGCAGTAAAATATCCAGAACCAGTTAACCACGTTCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf638725d3cf0d79700edf8a8f4b21ff32fa987b81bb992a23822e60f9dd3dd3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7388
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50