Protein

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Genbank accession
YP_011992538.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,85
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELIGAVEASAASAAAAKDSEIAAKESETNAKDSENLAAIYANSSETSATQSAASATEAERQAGLSKDSADASATSAEESKGFRDSAELAAQNAEQSRLLAEQAKKDAESAKTAAATSEQNAATSATESTNQAIAAAGSATEAGEYATTAKDSEIAAKTSELNAKNSENESAISAEASEASASQSAISASQSAASATKAAESSAAAKISETTAIESSAAAKTSEINAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFAAQASTSALAAKNSETNTKTSEINSKASEDAAKLAQQSASGSANTATQAMTTTKGYRDEAEVFKNTATTAATTATDKALEAAGSATIAGEKATNATSAADRAETAAASAEQVMQASLKKDQNLNDLANKDLAREALKVEAVNSVKDQYAGAYNSFRNPAWTYELRIANNGEWRVARNDNNSTSALSIGAGGTGAENVEGAKINFGIDRLKQTETETMMYAPGSNSPYRITIRPDAVWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAIIIPNNSNILGFMSTYAESGYYSSGELVTYQPPEASGWWMYELHVHGKNANGHVEYGNIVATAMNGNKWGIICSAGSWGGWYRIARSDRQLMLLSPDAQSALGDYSIAIGDHDSGLKWDRDGHISAFADSARIFAWTPSGINTYRVISSYVDDNARGMYVNGVRRGDPNALIAGQVEGGSFADWRSRASGLLVEHTGFDSAVAIFKSVYWGKDWIAGMDVVPWTSGGAETHLYVKGAEFIFDSAGNGSASNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNNDGQLDPKGEAIKGINYNGVVALLVNAFKEQKAKIDNQQEEINVLRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:983 AA
molecular weight: 103265,62980 Da
isoelectric point:4,82577
aromaticity:0,06409
hydropathy:-0,42452

Domains

Domains [InterPro]
DC_0608
ATT
2–192
DC_0608 DC_0415 DC_1205 DC_0971
Coil
Unmapped
132–162
Coil IPR030392
IPR030392
CHP
849–909
IPR030392 Coil
YP_011992538.1
1 983
Architecture
ATT
STR
STR
RBD
ATT 2-192 | STR 247-498 | STR 524-680 | RBD 703-983
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011992538.1
1 983
Domain Start End Length (AA) Confidence
N-terminal 1 366 366 0,7356
Central domain 367 565 200 0,5090
C-terminal 566 983 417 0,7257
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-366
Central
367-565
C-terminal
566-983

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SuperGirl
[NCBI] 		2851993 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus supergirl
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992538.1 [NCBI]
Genbank nucleotide accession
NC_105116.1 [NCBI]
CDS location
range 20922 -> 23873
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAGTATACGGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGTGAACTAATAGGGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTACGCTAACTCTTCAGAAACTTCTGCAACTCAATCTGCTGCTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACGTCAGCTGAGGAATCCAAAGGATTCCGTGATTCTGCTGAACTTGCTGCACAAAATGCTGAACAGAGTCGTCTATTAGCTGAACAAGCTAAGAAGGACGCTGAGTCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTACATCTGCTACTGAATCTACCAATCAGGCTATTGCTGCTGCTGGTTCTGCTACAGAGGCGGGAGAATACGCTACTACTGCAAAAGACTCCGAGATAGCTGCTAAGACTTCAGAACTTAATGCTAAGAATTCTGAGAATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAGTCTGCTATTTCTGCTTCTCAATCTGCTGCATCCGCTACTAAAGCTGCAGAATCATCAGCTGCAGCAAAAATTAGTGAAACTACTGCTATAGAATCATCAGCTGCAGCAAAAACTAGTGAGATTAATGCAAAAACTAGTGAGACTAATGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGTGAGACTAATGCTGCTGATTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAATACAAAGACTAGTGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAAGTGCATCAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGCTACAGAGACGAAGCAGAGGTATTTAAAAATACCGCCACTACTGCTGCAACGACAGCAACAGACAAGGCCCTGGAGGCCGCTGGTAGCGCTACAATAGCAGGAGAGAAAGCTACTAATGCCACCAGTGCAGCAGATAGAGCGGAGACAGCGGCTGCATCAGCAGAACAGGTTATGCAAGCGTCGTTAAAGAAGGATCAGAACCTTAATGATCTTGCAAACAAAGACCTTGCAAGGGAGGCGCTAAAAGTTGAGGCTGTTAATTCTGTAAAAGATCAATATGCTGGCGCTTATAATTCTTTTCGTAATCCTGCATGGACTTATGAATTACGGATCGCTAACAATGGGGAATGGCGCGTTGCGCGTAATGACAATAACAGCACATCTGCGCTTTCTATTGGTGCTGGCGGTACTGGTGCTGAAAACGTTGAGGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTATGCACCAGGGAGTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGTGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGCACTGGATCTAATACTGAAGTTGGAGCAAGAAAGAACTTAAATACTCCTGTTGGTGGTCAAGCAATTATTATTCCTAATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAGAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACGGTAAAAATGCAAACGGTCATGTTGAGTATGGAAATATTGTTGCAACCGCAATGAACGGTAATAAATGGGGTATCATTTGCAGTGCTGGCTCTTGGGGTGGATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCTGATGCTCAATCGGCTCTTGGTGATTACTCTATAGCAATTGGGGATCATGATTCAGGTCTTAAATGGGATCGTGATGGTCACATAAGCGCATTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGAATAAACACTTACAGGGTCATATCATCTTATGTTGATGATAACGCAAGGGGTATGTATGTAAATGGAGTTAGGCGCGGTGATCCAAACGCTCTTATTGCTGGTCAAGTTGAGGGTGGTTCATTTGCCGACTGGCGTAGTCGTGCGTCTGGATTGCTTGTTGAGCACACTGGATTTGATTCTGCGGTTGCCATATTTAAATCTGTTTATTGGGGGAAAGATTGGATAGCTGGCATGGATGTTGTTCCGTGGACTTCTGGCGGCGCTGAAACACATCTTTATGTTAAGGGCGCTGAATTTATTTTTGATAGTGCTGGAAATGGTAGCGCATCAAATTGGGTTAGCAGGTCTGACATTAGATTAAAAGCACATCTAAAAGAGATCGAAACGGCATCCGACAAAATTGATTATCTAACTGGTTATACTTACTACAAGCGCAACAATCTAATTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATCGCACAAGATGTTGAAAGGGTTTTGCCGGAAGCGGTTCATTCTTTGAATAACGATGGTCAGCTAGACCCAAAAGGCGAGGCAATCAAAGGCATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGCAAAGATTGATAATCAACAGGAGGAAATTAACGTATTACGCAATGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d73ccbbcf9a12c34c85d8c776360a3c3601099587212758448f7ad4a5a5c892
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5897
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank