Protein
View in Explore- Genbank accession
- CAJ1038981.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MKIYVDDSGDWGAYDDASGTIKPLPVDRGGTGAMDVAGARNNFGLGDTQDVNFGQVTLKTKNGANGGILISDNLNSSGERVSQSRFYSEAQGGICKTTIHTSGNGKNNYVQINEDGSMSGLQEILVAGTARAGLLRSNGDVWAAQGKSVGVLTTDGGNKNIMLQNMPGDGSAGSWVNLLQGNWYNGCWQLGAIRGSGSDISQVRLCVNNSGNDWKLFDFNNSYGGHITAMRGFKGQCVAGGWGLSGEYMGAPFYADSVVANNGGYSPVVAGGTRSTVGYDLRYSFGAISGGTGDWPRPNIHMMGDGTYHRGFDFRVDGRITAWDTGIWGGSFEFQRVATSDRDLKKDIEYNDGKASFDNIMKFKPSTFVYKSDKCNRLRRGVIAQDLYEIDPEYVRIIPGSPIIDNSVEYDESGAAVIIDYKDDTLGLDNNVIMIDTALATRYIGGIVEKQQEEIDNLKAEVEELKAMISKLIEK
- Physico‐chemical
properties -
protein length: 475 AA molecular weight: 51241,33680 Da isoelectric point: 4,92120 aromaticity: 0,09263 hydropathy: -0,39663
Domains
Domains [InterPro]
DC_0195
STR
8–475
STR
8–475
IPR030392
CHP
340–395
CHP
340–395
IPR030392
CHP
340–455
CHP
340–455
1
475
Architecture
STR 8-475
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
475
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0264 |
| Central domain | 11 | 201 | 192 | 0,2459 |
| C-terminal | 202 | 475 | 273 | 0,8839 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-201
11-201
C-terminal
202-475
202-475
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage vB_KppS-Samwise [NCBI] |
2762815 | Uroviricota > Caudoviricetes > Drexlerviridae > Henuseptimavirus > Henuseptimavirus samwise |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAJ1038981.1
[NCBI]
Genbank nucleotide accession
OY639337.1
[NCBI]
CDS location
range 48170 -> 49597
strand -
strand -
CDS
ATGAAAATCTATGTTGATGATAGCGGCGATTGGGGTGCGTATGACGATGCTAGCGGAACAATAAAGCCGCTTCCTGTTGATCGCGGCGGTACTGGTGCGATGGATGTTGCTGGCGCTCGCAATAACTTTGGACTTGGTGATACTCAGGATGTAAATTTTGGCCAGGTCACACTAAAAACAAAAAACGGCGCTAATGGAGGGATATTAATTAGTGACAACCTAAACTCCTCCGGTGAGCGTGTTAGCCAATCAAGGTTTTATAGTGAGGCTCAGGGCGGGATCTGTAAGACAACAATCCACACGTCGGGAAATGGCAAAAACAACTATGTTCAGATAAATGAAGATGGTTCTATGTCTGGACTTCAGGAGATTCTCGTTGCTGGCACTGCTCGCGCTGGTCTGCTGAGATCTAACGGTGACGTTTGGGCTGCGCAAGGTAAGTCTGTTGGGGTTCTAACAACTGACGGCGGCAATAAAAACATTATGCTGCAAAACATGCCTGGAGATGGTAGCGCGGGTTCGTGGGTTAACCTCCTGCAAGGTAACTGGTATAACGGTTGCTGGCAGTTAGGAGCAATTCGCGGATCTGGATCGGATATCTCGCAGGTTAGACTTTGCGTTAACAATTCGGGTAATGATTGGAAGTTGTTTGACTTCAATAACTCATACGGTGGTCATATTACGGCTATGCGTGGATTCAAAGGTCAGTGTGTGGCTGGCGGATGGGGTTTGAGTGGTGAGTATATGGGCGCTCCATTCTACGCAGACTCAGTAGTTGCAAACAACGGAGGTTATTCTCCTGTCGTTGCTGGAGGGACTCGCTCAACTGTAGGGTATGATTTGAGATACTCTTTCGGGGCGATATCTGGAGGTACTGGTGATTGGCCTAGACCAAACATCCATATGATGGGTGATGGTACATACCATAGAGGTTTTGATTTTCGCGTTGATGGAAGAATTACAGCTTGGGATACTGGAATTTGGGGTGGTAGCTTTGAGTTTCAGCGCGTGGCAACGTCTGACAGGGATTTGAAAAAGGATATTGAGTATAACGATGGTAAGGCATCGTTTGACAATATCATGAAATTCAAGCCGTCAACGTTCGTGTATAAGTCTGACAAATGCAACCGTCTGCGTCGCGGTGTTATCGCTCAAGACCTGTACGAGATAGATCCTGAATACGTGCGCATCATTCCTGGATCGCCAATCATCGACAATTCAGTAGAGTATGACGAGTCTGGTGCGGCAGTTATTATTGACTACAAGGATGATACTCTTGGACTTGATAACAACGTGATCATGATTGACACGGCGCTTGCAACTCGCTACATCGGCGGCATTGTTGAAAAACAGCAGGAGGAGATTGACAACCTTAAGGCTGAGGTTGAGGAGTTGAAAGCCATGATTTCAAAGCTTATTGAGAAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
90ace4882e21b21209220c38ecbfc62b6945ad05a3b171a561a12a7c3c845836
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50