Protein

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Genbank accession
WPK37754.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVVASNQSKPQQGKATANVEQKISTAQNASSEVQYTLFASGLNNGGRNVELKNKNYTDNIAILFDVVEDHTYTRTVDKTSYAVENKVKYSDHGVIEDGKFSFSARINSSPLYMIENNYIDKDTDPNNPVESRRPEKALEVLERLITDRQIVTLVTEDRIIENYILTSLEASRSNSDGAALVFQLEFTEFRTFTLGKTALATVYTDPKKSGGKTKQKGSVQSSATDDEVEVTARRTKFAGPNQDGWQKVADEMGIGDYTKQDQVVGTLTPDGKLKDQNGNIIDYNKAVGN
Physico‐chemical
properties
protein length:290 AA
molecular weight: 32042,08060 Da
isoelectric point:5,20471
aromaticity:0,07241
hydropathy:-0,66241

Domains

Domains [InterPro]
DC_0712
ATT
2–50
DC_0712 IPR048494
DC_1100
STR
76–280
DC_1100
WPK37754.1
1 290
Architecture
ATT
ATT
STR
ATT 2-50 | ATT 65-199 | STR 200-280 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV124
[NCBI] 		3077269 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK37754.1 [NCBI]
Genbank nucleotide accession
OR352954.1 [NCBI]
CDS location
range 112333 -> 113205
strand -
CDS
ATGGCAGTTGTAGCAAGCAACCAGTCCAAACCGCAACAAGGTAAGGCTACAGCAAACGTTGAGCAAAAGATCTCTACGGCTCAGAATGCCAGTAGTGAAGTTCAATATACGTTGTTTGCTAGCGGCCTTAATAATGGCGGAAGGAATGTAGAATTAAAAAATAAAAACTATACGGATAATATTGCGATCTTATTTGATGTTGTTGAAGACCATACGTATACAAGAACTGTTGACAAAACCTCCTACGCAGTAGAGAATAAGGTCAAATACAGTGATCACGGCGTAATAGAGGATGGTAAATTCTCTTTTAGTGCGAGAATAAACAGCTCACCACTATATATGATCGAAAACAACTATATCGACAAAGATACCGACCCTAACAATCCTGTCGAATCACGACGTCCTGAAAAGGCCTTAGAGGTTTTAGAAAGGCTCATCACTGATCGCCAAATCGTTACGCTTGTAACGGAAGATCGTATCATTGAAAACTATATCTTGACTTCCTTGGAAGCAAGTCGTAGCAATTCTGATGGGGCGGCTTTGGTGTTCCAACTTGAGTTTACAGAGTTCCGTACTTTTACCCTTGGGAAGACAGCCTTAGCCACGGTATATACCGACCCTAAAAAATCTGGTGGGAAAACAAAGCAGAAAGGTTCTGTTCAGTCTTCGGCTACAGATGACGAAGTAGAAGTCACTGCAAGGAGAACTAAGTTTGCTGGTCCTAATCAAGATGGTTGGCAAAAGGTTGCAGATGAGATGGGTATCGGCGATTATACCAAGCAAGACCAGGTGGTTGGTACGTTGACGCCGGATGGCAAGCTCAAGGACCAAAATGGTAATATCATCGACTATAATAAAGCGGTAGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
282f18851bc006454d1f60639b8da4226d8c51ee7cf588e366603f2c9aa9d934
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6581
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank