Protein

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Genbank accession
QVW28365.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MILTEQETIRICEKVKTILSVGIHEVVFEKINGTIRRLKCTRDLDLLPKKEDFKSETGKQGPRNSLYVFDVDLQQWRSFRFDKLISVNGLQTETLLVL
Physico‐chemical
properties
protein length:98 AA
molecular weight: 11424,19150 Da
isoelectric point:8,63807
aromaticity:0,07143
hydropathy:-0,24388

Domains

Domains [InterPro]
IPR024401
STR
13–85
IPR024401
QVW28365.1
1 98
Architecture
STR
STR 13-85 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage C6
[NCBI] 		2831681 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW28365.1 [NCBI]
Genbank nucleotide accession
MW679410.1 [NCBI]
CDS location
range 133240 -> 133536
strand -
CDS
ATGATTTTAACTGAACAAGAAACAATTCGCATTTGTGAAAAAGTAAAAACCATCCTGTCCGTAGGCATTCACGAAGTGGTGTTTGAAAAGATTAATGGTACTATTCGTCGTCTTAAATGTACCCGTGACTTAGACCTTCTTCCTAAAAAGGAAGACTTCAAATCTGAAACAGGTAAACAAGGCCCACGTAATTCTCTATATGTTTTTGATGTCGACCTTCAACAATGGCGTTCATTCCGTTTCGATAAGCTGATTTCTGTTAATGGCCTTCAGACCGAAACTCTGCTTGTCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
940edf228e281d02c0ac21f70911f61b59ae0821b97230c95f6c1a9305f64c74
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological properties of an Escherichia lytic phage infecting 4 pathogenic Escherichia coli strains Lin,Y. and Zhu,W. 2019-04-18 — GenBank