Protein

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Genbank accession
AGZ17823.1 [GenBank]
Protein name
DNA stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRNPERGQEITIPLLYGDGRRSTTLDWSTRLPENMLAVARTIKGGNGYMRMMPGIVKDKDVAGVSRGADWNTVKNATYRVMGDQLYLSGESVATISGVDRTPMAHSRNRVAIVSQNAMIMIGYDGSRNSFSNWTGEDDPTYDWGDINDVCHLRQRFIFSTKNSDTFWISDLLDETKPDKTAPAYRAETMPDGIVAIRAWRDYVVCFGTASIEFFGLTGDDQNVYASQPSYTVEAGTIGRESVCEYMETFAFLTSPFSGDLTIAMMNPGGGTWNEIASAEIKKILADYDVADLADVRLESLSFETHKLLIVHLPDKTLVYDHPVSQAQGVPVWSYIKTGINGIGPYRAVDFVNEGRVITCGDKLDPYLGKMDNTTSAQYGEDQEIVLYTPLLWAENAILADFRMDASTGGDSVASRIWLSATEDGIVYGQEKSIAYNTPYQWLQNVILRVVGRVRSAIGFKIRTVGATPATLSRARVRVT
Physico‐chemical
properties
protein length:479 AA
molecular weight: 53053,23200 Da
isoelectric point:5,06693
aromaticity:0,09603
hydropathy:-0,24050

Domains

Domains [InterPro]
IPR021098
STR
11–478
IPR021098
AGZ17823.1
1 479
Architecture
STR
STR 11-478 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGZ17823.1
1 479
Domain Start End Length (AA) Confidence
N-terminal 1 341 341 0,8282
Central domain 342 468 128 0,2549
C-terminal 469 479 10 0,9863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-341
Central
342-468
C-terminal
469-479

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage IME_EC2
[NCBI] 		1414766 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGZ17823.1 [NCBI]
Genbank nucleotide accession
KF591601 [NCBI]
CDS location
range 22464 -> 23903
strand -
CDS
ATGCGCAACCCAGAACGCGGGCAGGAGATCACGATCCCGCTGTTATATGGCGATGGTCGCCGATCGACGACGCTCGACTGGTCAACCCGGCTACCGGAGAACATGCTGGCGGTCGCCCGCACCATTAAGGGCGGCAACGGCTACATGCGCATGATGCCGGGGATCGTGAAGGACAAGGACGTGGCGGGCGTCTCTCGCGGCGCAGACTGGAACACGGTCAAAAATGCGACTTACCGCGTGATGGGTGATCAGCTGTACCTCTCCGGGGAGTCCGTGGCGACCATCTCCGGCGTGGACCGTACTCCTATGGCTCATAGCCGGAACCGCGTCGCCATTGTGTCCCAGAACGCCATGATCATGATCGGCTACGACGGGAGCCGGAACAGCTTCTCCAACTGGACCGGGGAAGATGATCCGACGTATGACTGGGGCGACATTAACGACGTGTGCCACCTCCGCCAGCGCTTTATCTTCTCCACGAAGAACTCGGACACCTTCTGGATCTCCGACCTGCTGGACGAGACGAAGCCGGACAAGACCGCCCCGGCCTACCGCGCCGAAACCATGCCGGACGGCATTGTGGCGATCAGGGCGTGGCGTGATTATGTCGTTTGTTTTGGGACCGCCTCGATCGAGTTCTTCGGCCTGACCGGGGACGATCAGAACGTCTACGCCAGCCAGCCGTCCTACACCGTCGAAGCCGGGACGATCGGGCGTGAAAGTGTCTGCGAATATATGGAGACTTTCGCCTTTCTTACGTCGCCATTCTCCGGCGATTTAACGATCGCCATGATGAACCCCGGCGGCGGTACGTGGAACGAGATCGCCAGCGCGGAGATCAAGAAGATTCTGGCGGACTATGACGTGGCAGACCTCGCCGACGTCCGTCTGGAGTCGCTCAGTTTTGAGACTCACAAACTTCTGATCGTCCACTTGCCGGACAAAACGCTGGTTTACGATCACCCAGTAAGCCAGGCGCAGGGCGTCCCGGTCTGGTCGTACATTAAGACGGGCATCAACGGGATCGGACCTTACCGCGCCGTGGACTTCGTGAACGAGGGCCGCGTGATCACCTGTGGCGACAAGCTGGATCCGTATCTGGGGAAAATGGATAACACCACGTCGGCCCAGTATGGCGAGGACCAGGAGATCGTCCTGTATACGCCGCTACTGTGGGCCGAGAATGCGATCCTTGCAGACTTCCGCATGGATGCCAGCACCGGGGGCGACTCAGTAGCGAGCCGGATCTGGCTCTCCGCGACCGAGGACGGGATCGTGTACGGGCAGGAGAAAAGCATCGCCTACAATACCCCGTACCAGTGGCTACAGAACGTTATCTTACGCGTAGTAGGCCGCGTCCGTTCCGCTATCGGCTTTAAAATCCGCACCGTAGGCGCAACCCCGGCGACTCTCTCGCGGGCGCGTGTCCGTGTGACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
126740089790dc51a0c9169f56667c035dac9b864eda480fa9f70864deff3169
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8453
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50