Protein

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UniProt accession
A0A088F649 [UniProt]
Protein name
Tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MATTIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELILNQDYRFATKTTISTTRALGPADGYTLIEIRRFTSATDRLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNVADAQDVGDAINLGQIQRWNDSTLNSANRAKQEADRATARANDANNSANAAASSASASSGSAELSKQWAVKETAVEPNLESSRTYALHSMSYRNAAKDSADRAAVSETNAKVSEGSAANSAAAAKVSETNAKASEERAITEASKLGNMNDFAAAIESVTGNDVKMKGAVSSPGNITGGGLVSTGAASIQKGALVGEDLIVGRDITAKQDMYSKRNITVAGVTYAQGGIEQTLATNIYNKLYRLHINNVPQHVGQRQGLHIGCNEGGRGESNFITNRGAGSGGFVFRTVNTENSVETGRVDITGDGVLYANHLQVRSGARIEGNNNIVGQNIYAGMGNAALNPDGNLSGGVWNNVGGHLWGMLNDTYRFAKPPAGVRLYTARGGYYLEGNVDGTSVGFRWFNSDRRLKEDIKVVRSADDMLSIIRAYIPVSYKYKDSTYKDNRGRDITITGKNSRAGFITQDLIRIWPEAVDIMSDGMQSPDPNQIIGGLMLLVKNLDARVQELESKLTTD
Physico‐chemical
properties
protein length:648 AA
molecular weight: 69727,72240 Da
isoelectric point:6,45204
aromaticity:0,06327
hydropathy:-0,39614

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil IPR030392
DC_0657
STR
1–630
DC_0657
IPR030392
CHP
540–608
IPR030392
A0A088F649
1 648
Architecture
ATT
STR
CHP
ATT 1-131 | STR 132-630 | CHP 631-645 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A088F649
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 208 208 0,8613
Central domain 209 407 200 0,6899
C-terminal 408 648 240 0,7859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-208
Central
209-407
C-terminal
408-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenP_AP5
[NCBI] 		1536611 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM40383.1 [NCBI]
Genbank nucleotide accession
KM253764 [NCBI]
CDS location
range 33050 -> 34996
strand +
CDS
ATGGCTACAACTATTAAGACCGTGATGACTTACCCGCTGGATGGCTCCACTACGGACTTCAATATTCCGTTTGAGTATCTGGCTCGTAAGTTCGTCCGAGTGACACTTATCGGTGTTGACCGAAAGGAACTCATCTTGAATCAAGACTATCGTTTTGCAACTAAGACCACAATCTCCACAACGAGAGCGTTGGGGCCAGCGGACGGTTATACTTTGATTGAAATCCGTCGATTCACCTCGGCTACCGATAGGCTGGTGGACTTTACCGATGGCTCAATCCTGCGGGCATACGATTTGAACATATCTCAGGTTCAGACACTTCACGTTGCTGAGGAAGCCCGTGACCTTACAGCTGATACAATTGGCGTTAACAATGATGGGAACTTGGATGCGCGTGGTCGTCGTATTGTGAACGTTGCGGATGCACAAGATGTAGGTGACGCAATCAACCTAGGTCAAATCCAACGGTGGAACGACTCTACGTTGAACTCTGCGAATCGAGCGAAACAGGAAGCTGACCGTGCGACCGCTCGTGCAAACGATGCGAACAACTCTGCGAACGCCGCAGCGTCCTCCGCTAGTGCCTCTTCTGGCTCCGCCGAATTATCAAAACAGTGGGCCGTTAAGGAAACCGCTGTGGAGCCAAATCTAGAATCATCACGAACCTACGCGCTTCACTCCATGTCATACCGCAATGCGGCTAAAGACTCTGCTGACCGTGCCGCCGTTTCAGAGACCAACGCTAAGGTCTCCGAAGGAAGCGCTGCTAACTCGGCTGCTGCCGCTAAGGTCTCAGAGACCAACGCTAAGGCCTCCGAGGAGAGGGCAATCACTGAGGCGAGCAAGCTGGGAAACATGAATGACTTTGCGGCTGCCATAGAGTCAGTGACAGGGAACGATGTGAAGATGAAGGGCGCTGTGTCCTCACCCGGCAATATCACAGGCGGTGGTTTAGTCTCCACAGGTGCGGCGAGTATCCAGAAAGGTGCGCTTGTTGGAGAGGACTTGATTGTTGGACGGGATATTACCGCAAAGCAGGATATGTACTCTAAGCGAAACATTACCGTAGCTGGGGTCACATATGCTCAGGGGGGCATTGAGCAAACACTAGCAACCAACATTTATAATAAGCTGTACCGACTCCACATTAACAACGTTCCACAACATGTAGGACAACGTCAGGGTCTACACATTGGGTGTAATGAGGGTGGTAGAGGGGAGTCAAACTTTATCACCAACCGTGGTGCCGGTTCGGGTGGATTCGTGTTCCGTACAGTCAACACTGAGAACTCAGTAGAGACTGGTAGAGTAGATATTACCGGAGACGGTGTACTCTACGCGAATCACCTACAGGTTCGTTCCGGTGCCCGAATTGAGGGAAACAACAACATCGTAGGTCAGAACATCTATGCAGGAATGGGCAACGCAGCACTAAACCCGGATGGGAACCTGAGCGGCGGTGTGTGGAACAACGTTGGTGGACACCTTTGGGGAATGCTCAACGACACCTACAGGTTCGCCAAGCCTCCTGCTGGGGTTCGCCTGTACACCGCCCGTGGTGGATACTACTTAGAGGGTAACGTTGATGGTACATCCGTTGGGTTCCGCTGGTTCAACTCAGACAGGAGACTAAAGGAAGACATTAAGGTTGTGCGCTCTGCCGATGACATGTTGAGCATTATTCGGGCATACATACCAGTGTCTTATAAGTATAAGGATTCAACATATAAGGATAATCGTGGACGCGACATTACTATCACTGGTAAGAACTCTCGTGCTGGTTTCATTACTCAGGACTTGATTCGAATCTGGCCGGAGGCGGTTGATATAATGAGCGATGGTATGCAGTCTCCAGACCCTAACCAGATTATTGGTGGATTGATGTTACTTGTTAAGAACCTAGACGCCCGCGTTCAGGAGCTTGAATCTAAACTTACGACAGACTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098671 adhesion receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
d04c570455dadb2885ec7beccd299a76d7320d05ac41aa68161a025d3151a77a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6572
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 25347934 PubMed