Protein

View in Explore
Genbank accession
QEI25768.1 [GenBank]
Protein name
tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMAGITKSIDGIGDKLDYLAIQLIEVTDKLEVGFDGVSRSVKAMGNDVAAATEKVQDRLYDTNRVLGGTARGFNDTAGAAGRASRAIGNTSGSARGATRDFAAMAKIGGSLPIMYAALASNIFVLQSAFEQLKLGDQLNRLEKFGVIVGTQTGTPVQSLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNINSLTTFQKQQAYANAVIAESTKRFGYLDEVLRATPWEQFAANADAALRTIQQSAAKYLGPVIDAINTVFYTSQASVSAEAARAQEKTNRQIDPTNVGAVALSLAASEEGYNKALDMYKESLDKRNKLKAEFDKRMSQADASTAAAIRLVGEGMPVGLAAGGFEVGGVRIGSSEANKKFVEETAAMGLQIARLGKEVDDSTENLNAWKSAYQAAGAAAAKASPEFQKQINLQRDTTDPDAVYDFNSTVLKGLTEQQKAYDQTKKTASDLANDFQNIASSTDTAAKTSATFEEVIKNISSLSAGTGKSADEYVKNLNLGFNTLSEMKTASQALSEYVKLTGNETKNQLAVQQKIADVYNQTKDKEKAQEAGRRLELQQLEEQEAALRRVLQTNQGNKAVEKEIEKIQLEKIKLTNQGMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYEWYTKQADKQKEAEQSRRSQAQIEREIWKFRQDQQAEMTSKRQEAFENTLTSMFPLAGEMQKMEMQLDFYTQMKELTKGNANEQMRWNAEIAKTRAQMSALTAQRNAQMQASVGSSLGAVYTPTTGLSGEDKDFADMGNRMASYDQAISKLSELNSEATAVAQSMGNLTNAMIQFSMGSLDTTSTIAAGMQTVASMIQYSTSQQVSAIDQAIAAEQKRDGKSEASKAKLKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMVAAGLAGALALAQASSASGMSSIADSGADTTQYLTLGERQKNIDVSMQASSGELSYLRGDKGIGNANSFVPRAEGGMMYPGVSYQMGEHGTEVVTPMVPMKATPNDQLSDGSKTTSGRPIILNISTMDAASFRDFASNNSTALRDAVELALNENGSTLKSLGNM
Physico‐chemical
properties
protein length:1236 AA
molecular weight: 133522,77600 Da
isoelectric point:5,60207
aromaticity:0,05663
hydropathy:-0,40461

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 IPR056208
PTHR18867
Unmapped
11–770
PTHR18867 Coil
Coil
Unmapped
445–465
Coil Coil
QEI25768.1
1 1236
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1198 | TAS 1199-1234 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE8
[NCBI] 		2592203 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus SE11
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI25768.1 [NCBI]
Genbank nucleotide accession
MK972716 [NCBI]
CDS location
range 50109 -> 53819
strand +
CDS
ATGACTGATAAGCTAATACGAGAATTATTAATAGACGTTAAACAGAAGGGGGCAACTCGTACTGCAAAGTCTATTGAAAACGTATCTGATGCGTTGGAAAACGCTGCTGCTGCTTCCGAACTGACAAATGAGCAGTTAGGTAAAATGCCCAAAACCCTTTACTCCATAGAGAGGGCAGCGGATAGAGCAGCGAAAAGTCTTACTAAAATGCAAGCTAGTAGGGGTATGGCTGGTATCACTAAATCCATTGATGGTATTGGTGATAAGCTAGATTACCTGGCTATCCAACTTATTGAAGTAACAGATAAACTAGAGGTTGGATTCGATGGAGTTTCTAGATCTGTTAAAGCAATGGGTAATGATGTTGCAGCTGCAACAGAAAAAGTTCAAGATAGATTGTATGACACCAATAGAGTTTTAGGTGGTACAGCTAGAGGTTTTAATGATACTGCTGGTGCCGCTGGTAGAGCTTCTAGAGCTATTGGTAATACTTCTGGTTCAGCACGTGGTGCAACTCGTGATTTTGCAGCAATGGCTAAGATAGGTGGTAGTTTACCTATTATGTACGCAGCTCTTGCTTCCAACATCTTCGTTTTGCAATCTGCATTCGAACAACTTAAACTAGGTGATCAGCTAAATCGTCTAGAAAAATTTGGTGTTATAGTAGGTACTCAGACAGGTACTCCTGTTCAGTCCCTTGCTAGATCACTACAAGAGGCAGCTGGCTATGCAATCTCTTTTGAAGAAGCTATGAGGCAAGCATCCTCAGCGTCCGCTTATGGATTTGATGCTGAACAACTTAATAAATTTGGTTTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGCGTTGATATGACTGATGCACTTAACCGTGTAATTAAGGGTGTATCTAAACAAGAAATAGAACTTCTGGATGAACTTGGTGTTACTATTCGTCTTAACGATGCTTATGCTGATTACGTTAAACAGTTAAATGCTGCAAACACAGGTATAACATATAATATTAATAGCCTTACTACCTTCCAGAAACAGCAAGCGTATGCTAATGCTGTTATAGCAGAATCTACTAAACGTTTTGGTTACTTAGATGAAGTTTTACGTGCTACTCCATGGGAGCAATTTGCTGCTAATGCTGATGCTGCACTAAGAACAATACAGCAGTCAGCTGCTAAATACTTGGGACCAGTTATTGATGCTATCAACACAGTATTTTATACTTCTCAGGCTTCTGTATCTGCTGAAGCAGCTAGAGCCCAAGAAAAAACTAATAGACAGATAGATCCTACTAACGTTGGTGCTGTTGCTTTAAGTTTAGCTGCTTCTGAAGAAGGATATAATAAAGCTCTGGATATGTATAAAGAGTCTCTGGATAAGCGTAATAAACTAAAGGCTGAGTTTGATAAACGTATGTCCCAAGCAGATGCTAGTACTGCCGCCGCTATTAGGTTGGTGGGTGAAGGGATGCCTGTTGGGTTAGCTGCTGGGGGATTTGAAGTAGGAGGAGTACGCATAGGTTCTTCCGAAGCTAATAAAAAGTTTGTAGAAGAAACCGCAGCTATGGGGCTACAGATAGCAAGGTTAGGTAAAGAAGTTGATGACTCTACTGAGAACCTTAATGCTTGGAAATCAGCATATCAAGCTGCTGGAGCTGCTGCTGCAAAGGCTAGTCCAGAGTTTCAGAAACAGATTAATCTACAGAGAGATACTACTGATCCTGATGCTGTATACGATTTTAACTCTACTGTATTAAAAGGACTAACTGAACAACAAAAAGCGTATGATCAGACTAAGAAAACTGCTAGTGACTTAGCTAATGACTTTCAAAATATAGCTAGTAGCACAGATACTGCGGCTAAAACAAGTGCAACTTTTGAAGAGGTAATTAAAAACATATCGTCTCTATCCGCAGGAACTGGTAAGAGCGCTGATGAGTACGTTAAAAATCTTAACTTAGGGTTTAACACCTTATCTGAAATGAAAACTGCATCCCAGGCGCTATCTGAGTATGTTAAACTAACCGGTAATGAAACTAAAAATCAGTTAGCAGTTCAACAGAAGATAGCTGATGTATACAATCAAACTAAAGATAAAGAAAAGGCACAGGAAGCCGGTAGGCGTTTAGAACTCCAACAGTTAGAAGAGCAAGAAGCTGCTTTACGCCGTGTTCTTCAAACAAACCAAGGGAATAAGGCTGTTGAGAAAGAGATTGAAAAAATTCAGCTGGAGAAAATTAAACTTACCAATCAGGGTATGGAAGCTCAGAAGAAGGTTAAGGATTATACAGATAAAATCCTGGGTGTAGATCGTGAGATAGCTCTCTTAAATAACCGTACTATGACAGATACCCAGTATCGTCTAGCACAGTTAAATCTTGAATTGACCATTGAAAAAGAGAAGTACGAATGGTATACAAAACAAGCGGACAAACAGAAAGAGGCTGAACAGTCTAGACGTTCTCAAGCCCAAATTGAACGTGAAATATGGAAATTCCGTCAGGACCAGCAAGCTGAAATGACCAGTAAAAGGCAAGAAGCCTTTGAAAATACCCTAACTTCCATGTTTCCTCTGGCAGGGGAAATGCAAAAAATGGAAATGCAGTTAGATTTTTATACTCAGATGAAAGAACTTACCAAAGGTAATGCTAACGAGCAAATGCGCTGGAATGCTGAAATAGCTAAGACAAGGGCTCAGATGTCAGCTTTAACAGCACAACGCAATGCTCAAATGCAAGCTTCTGTTGGGTCTTCTTTAGGTGCTGTGTACACTCCTACAACTGGACTATCCGGGGAAGACAAAGATTTTGCTGATATGGGAAATAGAATGGCTTCCTATGATCAGGCAATCTCTAAACTATCTGAGCTAAACTCTGAAGCAACCGCTGTGGCTCAAAGCATGGGTAATTTAACCAATGCTATGATTCAGTTCTCCATGGGGTCTTTAGATACTACTTCTACGATCGCAGCAGGTATGCAGACTGTAGCCTCTATGATTCAATACAGTACTAGCCAGCAGGTTAGTGCCATTGATCAAGCTATTGCAGCAGAGCAGAAACGTGATGGTAAATCAGAAGCATCTAAAGCTAAATTGAAGAAGTTGGAAGCTGAAAAGCTGAAGATTCAGCAAGATGCAGCTAAGAAACAAATTATTATCCAGACAGCAGTAGCAGTAATGCAAGCGGCAACAGCTGTACCATACCCGTTCTCTATTCCTTTGATGGTGGCGGCAGGTTTGGCAGGTGCCTTAGCTCTTGCTCAAGCATCTTCTGCATCTGGTATGTCTTCTATTGCAGATTCTGGAGCAGATACTACTCAGTACCTAACTTTAGGTGAGCGACAGAAGAACATTGATGTATCTATGCAAGCTAGTTCAGGAGAATTATCCTACTTACGTGGTGATAAGGGTATTGGTAATGCCAACTCATTTGTTCCGCGTGCTGAGGGTGGTATGATGTACCCTGGAGTTAGCTATCAAATGGGTGAGCACGGTACCGAAGTAGTAACTCCTATGGTTCCTATGAAAGCCACACCTAATGATCAGCTTTCCGATGGATCAAAGACTACCTCTGGAAGACCAATCATTCTGAATATTAGCACAATGGATGCTGCTAGCTTTAGAGATTTTGCATCGAATAACAGCACTGCTTTAAGAGATGCCGTGGAACTGGCTCTTAATGAGAATGGATCCACCCTTAAATCTCTTGGTAATATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
75ec8b9161ecf2b1566fd16a4d3ba7fd31802f7b47a324c85720653ee3e77203
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4402
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank