Protein

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Genbank accession
UJD20518.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTSLPIPSEDPRDLKFNAGKFDEVMTSDAHYYVDRFGVKRWTIAGFQYTAEEAIRAYGYITMDSFEDGATLTLPNQVLRYEATGEYYRWDGAFPKAVAAGSTPASTGGVGLGAWISVGDAAFRQEANKKFKYSVKLSDYSTLQEAATAAVDGLLIDINYNFTDGESVDFGGKILTINCKAKFIGDGALIFNNMGPGSVINQPFMESKTTPWVIFPWDADGKWITDAALVAATLKQSKIEGYQPGVNDWVKFPGLEALLPQNVKDQHITATLDIRSASRVEIRNAGGLMAAYLFRSCHHCKVIDSDSIIGGKDGIITFENLSGDWGLGNYVIGGRVHYGSGSGVQFLRNNGGESHNGGVIGVTSWRAGESGFKTYQGSVGGGTARNYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEHPFHQLPNNHLVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGMLANTYNRVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIRAAGIKPQPPKGLVISAPNSTISGLVGNVPPDKILVGNLLDAVLGQSRVIGFNSDTAELALRINKLSATLDSGALRSHLNGYAGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVAVAVLPDNAVRDNGAISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:675 AA
molecular weight: 71995,14180 Da
isoelectric point:5,15447
aromaticity:0,08889
hydropathy:-0,08859

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
63–119
G3DSA:2.10.10.80 IPR012332
G3DSA:2.10.10.80
ATT
63–125
G3DSA:2.10.10.80 IPR015331
IPR040775
RBD
64–123
IPR040775 IPR011050
IPR015331
RBD
129–675
IPR015331
UJD20518.1
1 675
Architecture
ATT
STR
ATT 63-125 | STR 126-675
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD20518.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9910
Central domain 146 579 435 0,9821
C-terminal 580 675 95 0,8742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-579
C-terminal
580-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage seszw
[NCBI] 		2865759 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD20518.1 [NCBI]
Genbank nucleotide accession
OL964751.1 [NCBI]
CDS location
range 20585 -> 22612
strand +
CDS
ATGGCTACCACACCGACTAGCTTACCAATCCCGTCAGAAGACCCGCGCGACCTGAAGTTTAACGCTGGTAAATTTGATGAAGTCATGACATCTGATGCACATTACTATGTGGACAGATTTGGCGTAAAACGCTGGACTATTGCTGGATTCCAGTACACTGCGGAAGAGGCCATTCGTGCTTATGGATATATCACAATGGATAGCTTTGAAGATGGCGCGACGTTGACGCTACCAAATCAGGTGCTACGTTACGAGGCAACCGGAGAATATTACCGATGGGATGGTGCATTTCCTAAGGCTGTAGCTGCTGGTTCAACTCCTGCATCAACTGGTGGCGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGACGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAATTATCAGATTATTCTACCTTGCAGGAAGCAGCGACAGCAGCCGTAGATGGATTGCTTATTGATATCAATTACAACTTCACAGATGGTGAGTCTGTAGATTTTGGTGGTAAGATTTTAACCATTAACTGTAAGGCTAAGTTTATTGGAGATGGGGCTTTAATATTTAATAATATGGGGCCAGGCTCGGTAATTAATCAACCATTCATGGAGAGCAAGACTACTCCATGGGTCATTTTCCCGTGGGATGCTGATGGTAAATGGATTACAGATGCTGCCCTTGTTGCTGCAACGCTGAAGCAATCAAAGATTGAAGGCTATCAACCTGGGGTAAATGACTGGGTTAAATTCCCTGGATTAGAGGCATTACTCCCACAGAACGTTAAAGACCAACATATTACAGCCACTCTAGATATTCGCAGTGCCAGCCGAGTAGAAATAAGAAATGCTGGTGGTCTTATGGCTGCTTACCTTTTCCGTAGTTGTCATCACTGCAAGGTAATTGATTCAGATAGCATCATTGGTGGTAAAGATGGAATCATTACCTTTGAGAACCTTAGTGGTGATTGGGGATTAGGTAATTATGTTATTGGTGGACGTGTTCATTATGGTTCTGGTAGTGGTGTTCAGTTCCTGAGAAATAATGGTGGTGAATCCCACAATGGTGGAGTTATTGGTGTTACATCATGGCGAGCTGGTGAGTCTGGTTTCAAGACTTATCAGGGTTCCGTTGGTGGTGGTACTGCACGTAACTATAATCTACAGTTCAGGGATTCTGTTGCATTGTCTCCTGTTTGGGATGGTTTTGACTTGGGTTCTGACCCAGGTATGGCACCAGAACCGGATAGACCTGGGGATTTACCTGTATCTGAACATCCATTCCACCAACTGCCTAATAACCATTTGGTTGATAATATTCTTGTTATGAACTCACTTGGTGTTGGTTTAGGTATGGATGGTCGTGGTGGGTATGTTTCTAACGTTACCGTACAGGATTGTGCTGGTGCAGGTATGCTTGCAAATACTTACAACCGTGTATTTTCTAACATTACAGTTATTGATTGTAACTACCTTAATTTTGATTCTGACCAAATTATCATTATAGGTGATTGTATTGTTAATGGGATTAGGGCTGCTGGGATTAAACCACAACCACCAAAAGGTCTGGTTATCAGTGCACCAAACTCTACAATAAGTGGGTTGGTCGGTAATGTTCCTCCAGATAAAATTCTTGTTGGTAACTTACTTGACGCAGTATTAGGTCAGTCTAGAGTCATCGGGTTCAATAGTGATACTGCTGAGTTGGCTCTACGTATTAACAAGCTGTCAGCTACTCTGGATAGTGGTGCTTTACGTTCCCATCTGAACGGTTATGCTGGTTCTGGTTCAGCATGGACAGAAATTACCGCTATTGCGGGGTCCTTGCCTGATGCCGTGTCATTAAAAATAAACAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGGTGGCCGTCCTACCAGACAACGCTGTCAGGGATAACGGGGCTATATCACTGTATCTGGAAGGCGATAGCCTTAAGGCGTTAGTTAAGCGGGCCGATGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea69dd10df1d9c3cf60e463e86615bc1e76b92ecbf730f08dc32fd25d5a923b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome-scale top-down reduction of phages to generate viable simplified phage backbone Yuans,S. and Ma,Y. 2025 — GenBank