Protein

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Genbank accession
WNO24892.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSGTLTKFPTGSTQYKINFDYLSRKFVKVTLSNSLDATLNKELVVGNDYRFLSATTLEILASQSGFDVIQIYRQTSSELMVDFRDGSVLTSSDLTTAELQAIHIAEEGRDQTVEQAVQFAEAAEKSAEDAAASLSGIKDIIANNNIDSTIRSDLSKSDGYTMIGGLSERFSLPYKWVVVDNAPYNGDLEKAVSESSDGTGFLLGIGKSYDFLTFRNARNTKKNLTFVGGGVPELSADTRSLVAGTGTIIRGPMKTEAGGFQLVNLGVDCGGVVSDELLGGQWDDPIQCYGIGKEANVFIDNVKTLSHTNLTGPNYPGTHSLLLEILDGAYVGKVELIGGYHGLTLKGTNLDVMDAHCYGQRGDAFIIKSDSAAPAADIYVGRLKVGLRDNSKFTDVTMGGIYDAHDGVNIDNVEIGSLQVYNASWGLIPSNENTGYISNLRIGNYVAMNVYGNYYSLVIDGRCVGVNIGEHQCSNTSGGISIDPSSVNVSLGNGFSKCATKSGYKLGGNSLVHGNLIADENGEYGVDYAGGLGFDASKVLGYSNPFGLVSTEVSALGSTTGPKNGWGDTGDFSWVMHGKMSIVNGALIKGAGAVPYTSLPITAPRRRTRIAAWGVQGSSMIPVECYVEANGDLNVVGWESITDGNVINFSGQYLAK
Physico‐chemical
properties
protein length:656 AA
molecular weight: 69683,05810 Da
isoelectric point:4,86050
aromaticity:0,08537
hydropathy:-0,10960

Domains

Domains [InterPro]
DC_1263
ATT
1–197
DC_1263
IPR005604
ATT
12–114
IPR005604 DC_0478
WNO24892.1
1 656
Architecture
ATT
STR
ATT 1-197 | STR 198-656
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO24892.1
1 656
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9947
Central domain 186 545 361 0,9914
C-terminal 546 656 110 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-545
C-terminal
546-656

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PRF-SP11
[NCBI] 		3075857 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO24892.1 [NCBI]
Genbank nucleotide accession
OR352819.1 [NCBI]
CDS location
range 6221 -> 8191
strand -
CDS
ATGTCCGGAACTCTTACTAAATTCCCAACTGGAAGCACACAATATAAGATTAACTTCGACTACTTATCCCGTAAGTTTGTTAAAGTTACTTTAAGCAACTCTCTTGATGCTACCTTAAATAAAGAGCTAGTGGTTGGTAACGATTACCGCTTCCTTAGTGCAACCACATTAGAAATACTAGCCAGTCAATCTGGGTTCGACGTCATACAGATTTATCGCCAAACGTCTTCAGAGCTTATGGTTGATTTCAGAGATGGCTCAGTATTGACCTCATCCGACCTCACAACGGCTGAGCTTCAGGCCATCCATATCGCCGAGGAGGGCAGAGACCAGACGGTTGAACAGGCCGTGCAGTTTGCGGAAGCTGCTGAGAAATCTGCCGAGGACGCTGCCGCATCACTTAGCGGGATTAAGGACATAATCGCTAACAACAATATCGATTCAACAATCCGTTCAGACCTGTCCAAGTCGGATGGATACACAATGATTGGCGGACTGTCTGAACGATTCAGTCTACCCTACAAGTGGGTGGTAGTGGATAACGCTCCTTATAATGGCGACCTTGAGAAGGCCGTATCCGAAAGTTCAGACGGTACGGGATTCCTATTAGGTATAGGGAAATCCTACGACTTCCTTACATTCCGCAACGCTCGTAACACTAAGAAGAACCTAACGTTCGTTGGTGGAGGGGTCCCGGAGCTGTCTGCCGATACACGGAGCCTTGTTGCTGGTACTGGAACGATAATCAGAGGACCAATGAAGACTGAGGCTGGTGGGTTCCAGTTAGTGAATCTAGGCGTTGACTGTGGTGGCGTGGTGTCAGACGAACTTCTAGGCGGTCAATGGGACGACCCTATCCAGTGCTATGGTATTGGTAAAGAGGCAAATGTTTTTATAGATAACGTTAAAACCCTGAGCCATACAAACCTCACTGGTCCAAACTACCCAGGAACTCACAGCTTGCTTCTTGAGATTCTTGACGGAGCTTATGTTGGAAAGGTAGAACTGATTGGCGGCTACCACGGTCTGACCCTTAAGGGGACTAACTTAGATGTGATGGACGCCCACTGTTACGGACAAAGAGGCGATGCGTTTATTATTAAGTCTGACTCTGCTGCGCCGGCTGCTGATATCTACGTCGGAAGACTTAAGGTAGGGCTTCGTGATAACTCTAAGTTTACAGATGTTACTATGGGCGGCATCTACGACGCTCACGATGGGGTTAACATAGATAACGTGGAGATAGGCTCTCTTCAGGTCTACAACGCATCATGGGGGCTCATTCCCTCAAATGAAAATACTGGTTATATCAGCAACTTGCGTATTGGGAACTACGTGGCTATGAACGTATATGGTAACTACTATTCGCTAGTGATTGATGGTCGCTGCGTTGGTGTTAACATAGGGGAGCACCAGTGTTCTAATACATCTGGCGGAATCAGCATAGACCCTTCCTCTGTTAACGTGTCATTGGGTAACGGATTCTCAAAGTGTGCCACAAAGTCTGGTTACAAGCTGGGTGGTAACTCTCTGGTTCACGGGAACCTGATAGCCGATGAGAATGGTGAGTACGGTGTTGATTATGCTGGTGGCCTAGGGTTCGATGCATCAAAAGTTCTAGGGTATAGTAACCCATTCGGTCTGGTGTCGACTGAGGTTAGCGCCCTTGGGTCAACTACTGGACCTAAGAATGGATGGGGAGACACCGGGGACTTTTCATGGGTAATGCATGGCAAGATGTCGATAGTAAACGGAGCCCTTATTAAGGGAGCTGGGGCTGTTCCATACACATCCCTACCAATAACGGCGCCTCGCAGGAGAACGCGCATCGCTGCATGGGGTGTGCAAGGGTCGAGCATGATTCCAGTCGAGTGCTATGTGGAAGCGAATGGGGACCTTAACGTCGTTGGCTGGGAGTCCATTACAGACGGAAACGTGATAAACTTCTCCGGTCAGTACCTAGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
986a20fa58832f3ba2505650c108e268bd4a6afe5a86e754005125929b693c53
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8101
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50