Protein

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Genbank accession
WPA89943.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNPTLVSTPFAENGDKNIIPESVGAAPQNATMQAGFPPITQQKISEGGIPPERNDFNGILNLYGQHIVHLNKGLPYEFDQSFADAIGGYPLNARLMLDNGDIVKNTTPNNTTNPNTDMTGWVNVSKGTIYTVGSVSEMLGLNPSYQNRTIVVKATGAMYQYNPDDAGVNNKIYILNGWNLIGYHDVLLATLAGIKGDGTDEKDAAQALLDAASSLGRPINMCGLSFFTSPLTATGDLELFGGGEIRLYAGSNGTLINSAYNLVIKGVGLDQNKINNNGGTISAESHCTIKHSGDVLELRGVKIKPSTSINVVTRAKKTAIAENVEIDGGMIGFYAIPSANAKVDLIGGEYKNAHLYDNIQILNGTDVAIERVKSHDSARSCIVVSNSTTKARIFANIVYGAKVDGANQGGWGIAASVNSQDSIISLNSCYGNQRGCISVDTYPDSGPSVDNRIIVSGNLCNGEYNGTYGTTGIILNNAKHSNVYGNIIYKVAQGMIGVDCDYSNIQSNVFIDCRDYFANFTTAHDVKFDNNLCDGCSVTGAAALRFIDSNRFKSTNNTIKNLTGAGGLVYRVSNTAAGATRDWLISDNDVYRNVAGFGYIFHILGDNNTGGKIRRNNFKADGVTGWQWYILSDNLATFSTHENELESTGTGYITSGANVTAGDDTINGSRNVWSATPTAFKSRTGQIATIAKIVKSFDGTNWNSANVVAVTYDPPSIPANGGQITTTVTATGAVIGDFAQATFSVFDANIDISAIVTATNQVTVKFRNNSASAIDLASGTLRVRVT
Physico‐chemical
properties
protein length:787 AA
molecular weight: 83609,18660 Da
isoelectric point:5,54046
aromaticity:0,08005
hydropathy:-0,16341

Domains

Domains [InterPro]
DC_0704
ATT
1–223
DC_0704 DC_0706
IPR012334
STR
193–536
IPR012334
IPR011050
STR
199–576
IPR011050
WPA89943.1
1 787
Architecture
ATT
STR
ATT 1-223 | STR 224-787
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPA89943.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,9934
Central domain 203 669 468 0,9914
C-terminal 670 787 117 0,9800
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-669
C-terminal
670-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SR
[NCBI] 		3090860 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPA89943.1 [NCBI]
Genbank nucleotide accession
OR665530.1 [NCBI]
CDS location
range 15816 -> 18179
strand +
CDS
ATGACAAATCCAACTTTAGTTAGTACCCCATTCGCCGAAAATGGCGATAAAAATATCATTCCCGAATCAGTTGGCGCTGCTCCGCAAAACGCAACTATGCAAGCTGGATTCCCGCCAATTACCCAACAAAAGATTTCCGAGGGTGGTATTCCTCCTGAACGAAATGACTTTAATGGGATATTAAATTTATATGGTCAGCACATTGTTCACCTGAATAAAGGCTTGCCTTATGAATTTGATCAAAGTTTTGCAGATGCAATTGGTGGTTATCCATTAAATGCAAGATTAATGCTTGATAATGGAGATATTGTAAAAAATACCACCCCAAACAATACAACCAACCCAAATACAGATATGACTGGTTGGGTTAATGTTAGTAAAGGAACAATCTATACCGTTGGATCTGTTTCTGAGATGCTTGGATTAAATCCATCTTACCAAAATAGAACAATTGTTGTTAAGGCAACTGGGGCTATGTATCAATATAATCCCGATGATGCTGGTGTCAACAATAAAATATATATTCTTAATGGATGGAATCTTATTGGCTACCATGATGTTTTACTTGCAACACTGGCTGGAATTAAGGGTGATGGAACTGACGAAAAAGATGCTGCTCAGGCATTACTTGATGCCGCATCATCTCTTGGACGCCCGATTAATATGTGTGGGTTGTCATTTTTTACATCTCCATTAACAGCTACTGGGGATTTAGAGCTATTTGGTGGGGGAGAAATTAGGCTTTATGCTGGCAGCAATGGAACCTTGATTAATAGCGCTTATAATCTAGTGATTAAAGGGGTGGGGCTTGATCAAAACAAGATTAATAATAATGGAGGAACCATTAGTGCTGAATCCCATTGCACAATTAAACATAGTGGAGATGTTTTAGAATTACGTGGGGTTAAGATTAAACCATCAACATCTATTAATGTTGTTACCAGAGCAAAGAAAACAGCAATTGCAGAAAATGTTGAGATTGATGGCGGTATGATTGGCTTTTACGCAATCCCATCTGCAAATGCTAAAGTTGATCTTATTGGTGGTGAATACAAAAATGCTCACCTATATGACAATATCCAGATTTTAAACGGAACAGATGTTGCAATTGAGAGGGTTAAATCTCATGATTCCGCTAGAAGTTGTATTGTTGTCAGTAATTCAACAACGAAAGCTCGAATCTTTGCAAATATCGTTTATGGTGCAAAAGTTGATGGAGCAAATCAGGGTGGCTGGGGTATTGCCGCATCTGTCAATTCTCAAGACTCGATAATATCCCTGAACTCATGCTATGGAAATCAAAGGGGCTGTATTAGTGTTGATACGTATCCAGATAGCGGCCCAAGTGTTGATAATCGAATAATTGTATCTGGGAACCTATGTAATGGGGAATATAATGGCACATACGGAACAACAGGTATTATTTTAAATAATGCTAAGCATAGTAATGTTTATGGAAATATTATTTATAAAGTTGCACAAGGCATGATTGGCGTTGACTGTGACTACTCTAACATTCAGAGTAATGTATTTATAGATTGTCGAGACTACTTTGCTAACTTTACTACAGCGCACGATGTGAAATTTGATAACAATCTTTGTGACGGATGCTCTGTTACTGGTGCGGCCGCTTTAAGATTTATCGATAGCAATCGATTCAAGAGTACCAATAACACTATTAAAAATCTAACTGGTGCTGGTGGCCTTGTTTACAGGGTAAGTAATACGGCAGCAGGAGCAACTAGGGATTGGCTAATATCAGACAATGATGTATACAGAAACGTTGCTGGATTTGGATATATATTCCACATACTAGGAGATAATAATACTGGAGGTAAGATTAGACGGAATAACTTTAAGGCTGACGGTGTAACTGGTTGGCAGTGGTATATATTATCAGATAATCTCGCAACATTCTCCACGCATGAGAATGAGCTTGAGTCAACAGGAACAGGATATATTACTTCTGGAGCTAATGTTACTGCTGGAGATGATACAATTAACGGGTCTCGAAATGTATGGTCTGCTACTCCAACTGCCTTCAAGTCAAGAACAGGTCAAATCGCCACAATTGCTAAAATTGTAAAATCATTTGACGGCACCAACTGGAACTCTGCCAACGTTGTTGCAGTTACTTATGATCCACCTTCCATTCCTGCTAATGGTGGTCAAATTACAACTACTGTTACTGCTACTGGCGCAGTTATTGGGGATTTTGCGCAGGCCACATTTAGTGTTTTTGATGCGAATATTGATATAAGTGCTATAGTTACTGCAACAAATCAGGTTACAGTTAAGTTTAGAAACAATAGCGCTTCCGCAATAGACTTGGCAAGCGGAACATTGCGAGTAAGAGTAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88d5d774787f8dc5d917c6ffed979b690fe7a58ba1557801650f2a38947d4d7d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3029
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, Sequencing, and phage cocktail evaluation of SR and NL Phages in BALB/c mouse against Carbapenem resistant Acinetobacter baumannii Zeshan,M. and Janjua,H.A. 2022-09-01 — GenBank