Protein

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UniProt accession
M4QDB5 [UniProt]
Protein name
DUF1565 domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MATRIKLKRSTTATVVPTTSNLEDGEVALNIQDRKLYARNGSNIIEVANQKPNTGEVTTTMFATDVTNGPGNTFFVASTGNNNTTLANGGANGKHADTPFLTITKALETATSGDTIHIAAGEYQEVFPMTVPDGVTLRGANLRSTSVKPTGATNTNNAFILSGDCHVSDLTIKEFFYDSGNDKGYAFVVVSNMNSTQSPYVERVTVNTKGSVVSGSDPYGYTQGDAGRGALLDGANIAAASQHSSVLFNECTFITPNQVGLKITNGMRVEWLNCFNYFASIGIEGAQGATGKSGTGSTRLKFGGTSGTFSSSEVAYQLEDSFQSGTYARSGSTVTLTRTGHGLVTGDYIYADHISGGATDGFYQVTLVDANNVTYSSGSGTISSSNVTYKKAVATGTVASNDGTYVFITGKGTGEFTTVNKPTKTLSRFGDSQLSTAQKKFGTASILLDGTEDNVKVPTDEDFGFGSANFCIEAFIRPGSVTGTQRIFDLRDNSATDTAPTVYLDGTTLHYAVGNTSQINGGTLSTNTWYHVAVARSNGTTRLFLDGTQLGTYTDNNDYGSTKPVIIGSNYAASPVEAFNGYVDEVRISKASARFTAAFTPTTTEYGSDLNTVLLLHANGDNASTTFTDVSGGISDIRSSGGDSATSVITADYSAFGAELRSVASACVYGQKGVQADGSGVKLILTAHNFGYVGSGDDFTNDPSLAIQANEVVELNGGKVLYSSTDQDGDFRVGDAFTVDQETGNVQFQATSSAQSAANITLSDATGTTNIFPAYIETGNLRFAGNSMTSTAGQVIVDPAGEEDFVVNAETIVKEAVYFDVNKSISFGSTIQGALKIAGFGGSTVFGSSEASSFSTRSFVLLKNGLGTVNLTGAGSGYLSGQQTVDVTTNPFQTAQATAVLGTSGGLKTFTVTNRGIGYTALPTVTIDGSGNGAATAAFGVSGDIRSVTIGNGGSNYASPTGAIDAPPTNVFTGGATYEDANEVSYPVVDTSANTIYIPSHTFETGMEAIFDASTLDATATPVGGLTSSQSYYAIRVDQNLLKLASSLSDANAGNAISLTGQGTGDQFFQGRQATVNVGQTGGVIDTVTVTDIGSGYGAQPDLTITDSAGSNATFTVNVGRAINAVTVDTIGSYSSVPNITFTNASGDTTGSGAAATVALGYAVASVTLNNQGLGYRNLPTLSADGTPVAAAAFTVVLNEQEGRIGSIVVQNGGSGYDTAPTLTFTGGGGSGGQLLADVQSLTGNISANGSGYAPGVYPDVGFTVVTAAGTVSTVATATFTVPGFDGTITTAGSGYADGTYTSVPLVNTPTATYTVTVVTRDKN
Physico‐chemical
properties
protein length:1324 AA
molecular weight: 135796,85010 Da
isoelectric point:4,53316
aromaticity:0,08384
hydropathy:-0,09350

Domains

Domains [InterPro]
DC_0763
STR
3–780
DC_0763 DC_0155 DC_0155
IPR011050
STR
97–405
IPR011050 G3DSA:2.60.120.200 DC_0155
IPR023366
STR
321–400
IPR023366 IPR013320
PF13385
LEC
449–590
PF13385
M4QDB5
1 1324
Architecture
STR
STR
STR 3-780 | STR 801-1322 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
M4QDB5
1 1324
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,7176
Central domain 131 434 305 0,9785
C-terminal 435 1324 889 0,0975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-434
C-terminal
435-1324

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage MED4-213
[NCBI] 		889956 Uroviricota > Caudoviricetes > Eurybiavirus >
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
581473bb945e8ef11d7980378818c50611a8c0f72811f595fca11eaaceae94e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50