Protein

View in Explore
Genbank accession
ATS92200.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
Protein sequence
MAFVTGTAANHVDALDKLRLFLTSDDALSSLGQTWAQLRWVPDNVDSVDTNIPFGSGVQLPRLFRPDYRTQNYTSETGGQYLSSTSFTSGQYVRLKMRAAKAVTKFTLKAGTGSSLTNYTPRNFRLEYSDDGSTWSTAVTLTDQRAWVANEERTFSVPSTGEHLWWRLVTLQTGDYQGTLTGQYWELRSIWLYDGDVLVSSSESNLVVKGPGLAGDEEIFLAFRTTYNTGTGEYAILVQGLTGYLPAEQSLHKQPGLHPSGWPVVPLWSAAMPYWFVGSGRRVVFVFKVSTVFESGYAGFFLPYASPEQYPYPLAIGGSMSPASSSYRYDYVSAAHSCFVMPGGNTGTSSSVDVVYNTTLNVMLPDGSWFDFQNRPTTSSNNSESYLTWNNSPASVLPHGTFNDTTTSGYGFRENIGGGFSVFPATLFQRRTAGRFLGELDGCFQISGFQNGSENTGTIAGEDYLVFQNTYRTDVREYWALKAE
Physico‐chemical
properties
protein length:484 AA
molecular weight: 53430,53880 Da
isoelectric point:5,19397
aromaticity:0,14050
hydropathy:-0,28988

Domains

Domains [InterPro]
DC_0072
STR
1–111
DC_0072 DC_0072
G3DSA:2.60.120.260
STR
67–194
G3DSA:2.60.120.260
IPR008979
STR
80–155
IPR008979
DC_0072
STR
107–170
DC_0072
ATS92200.1
1 484
Architecture
STR
STR 1-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage DLP4
[NCBI] 		2047758 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS92200.1 [NCBI]
Genbank nucleotide accession
MG018224.1 [NCBI]
CDS location
range 62490 -> 63944
strand +
CDS
ATGGCCTTCGTAACAGGCACGGCCGCCAACCACGTGGACGCGCTGGACAAGCTGCGCCTGTTCCTGACCAGCGACGACGCCCTGTCGTCGCTTGGTCAGACCTGGGCCCAGCTGCGGTGGGTACCCGACAACGTGGACTCGGTCGACACCAATATCCCGTTCGGCTCGGGCGTCCAGCTGCCGCGCCTGTTCCGGCCGGACTACCGGACCCAGAACTACACCTCGGAGACCGGCGGTCAGTACCTGAGCTCCACGTCGTTCACCTCCGGGCAGTACGTCCGCCTGAAGATGCGCGCCGCCAAGGCGGTGACCAAGTTCACCCTGAAGGCCGGCACGGGCTCGAGTCTCACGAACTACACCCCGCGCAACTTCCGACTGGAGTACTCGGACGACGGCTCAACCTGGTCGACCGCCGTCACGCTGACCGACCAGCGGGCCTGGGTGGCTAACGAGGAGCGCACCTTCTCGGTGCCCTCGACCGGCGAGCATCTGTGGTGGCGTTTGGTCACCTTGCAGACCGGCGACTACCAGGGCACGCTGACCGGGCAGTACTGGGAGCTGCGCTCCATCTGGCTGTACGACGGCGACGTCCTGGTGTCCTCCTCGGAGTCCAACCTGGTGGTCAAGGGCCCGGGTCTGGCAGGCGACGAGGAGATCTTCCTCGCCTTCCGCACCACCTACAACACCGGCACCGGCGAGTACGCCATCCTGGTACAGGGGCTCACTGGCTATCTGCCGGCTGAACAGTCCCTGCACAAGCAGCCCGGCCTGCACCCGAGCGGGTGGCCGGTGGTGCCCCTCTGGTCGGCGGCCATGCCATATTGGTTCGTCGGTAGCGGCCGGCGAGTGGTCTTCGTGTTCAAGGTGTCCACCGTCTTCGAGTCGGGGTACGCCGGGTTCTTCCTGCCGTACGCCTCTCCGGAACAGTACCCATACCCCCTGGCTATCGGTGGGTCCATGTCGCCCGCGTCGTCAAGCTACCGGTACGATTACGTGTCGGCGGCGCACAGCTGCTTCGTCATGCCCGGCGGAAATACCGGCACCAGCTCAAGCGTGGACGTGGTGTACAACACCACCCTCAATGTCATGCTGCCCGACGGGAGCTGGTTCGACTTCCAGAACCGGCCCACGACCAGCAGCAACAACTCCGAGAGCTACCTGACCTGGAATAACTCTCCGGCCAGTGTGCTGCCGCACGGCACCTTCAACGACACCACCACCTCGGGCTACGGCTTCCGCGAGAACATTGGCGGGGGTTTCTCGGTCTTCCCCGCGACGCTGTTCCAGCGGCGCACGGCCGGCCGGTTCCTCGGCGAGCTGGACGGCTGTTTCCAGATCTCGGGGTTCCAGAACGGTTCCGAGAACACCGGCACCATAGCGGGCGAGGACTACCTCGTCTTCCAGAACACCTACCGGACCGACGTACGAGAGTACTGGGCCCTCAAGGCGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7990f43466698f900f1e6a8a9aca76439458970bdc2cc81abbd67a924e06e654
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lysogenic conversion of Stenotrophomonas maltophilia by temperate phage DLP4 Dennis,J. and Stothard,P. 2019-04-16 — GenBank