Protein

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Genbank accession
AUR83717.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLNTFTEQNMTSINKLTQTPTLEDNDLSVVWQNSSGRTRAITIENLRHFIQSTDPNADAFVKAELVGDELILTAHDETETRIDINILPDHSVTELKDMPDTLVSGEYLKVNDAGNGFVLTPASEASATLLVRENGQLKGAANVLDFGNATISLANKIANIKLNVQFANTRTMIFDDNEKEYLSVDRTTPVIVTEEIDSLVLCKTTEPESETDAPKVRKASVGELASGFSVCPDGTSAGTQILQASSGTYSLTQMTFAVGAAVDDSVYIGPDGKLTLDQSDYVVGWVLTDGVIIDIDLYNATVTAKSQSEDTPTFKSVDIDTAGSGNSNFAASIHQDGELHTIIDATRELRIKYKDISTGDTTTVAGIDNNQAQFLVPILQGVDPVALKKDIPDTDDLARKSQPNAFTESQTINNAEFKVRDGEGSSIFRVRPDNNTVVSNVPVKVNDKLECAELITRIVNSPDNIVNLKAYGSTNISMGSEYTQTQKPMLFNKIVEFYDNALYYGGTTEPKNLMTKEAVEALIPDDNGGGDSNWHLLNKVSYESSTVNTESTGQGTIHEFLGSGSTSAVHTHTFNDSGVVWIANFQVSSARDKTVEVKSSVSSVGMTGFKIPVNMITRFSYCKETNKMYSEASYIRPELIDFTPNSDFNAKSGYDRVSSGGGSTHRIEYWENGTIFKISNSKVEVHLLEGMNSEDSKHGYVKYINSRNDDVTFEWYDRNGNRINNSTVPSTCPANTVVDIFANYDTDDYFLTFGQSIAISGSALEEIVVNSEVFDHIDISGFDSENTQLKIVKKSFTDKDLISIPVELPEGFDVLVSSVICKVNGRLKKQPFEYQYENGILRVHLNEVCSGIIIAELIK
Physico‐chemical
properties
protein length:859 AA
molecular weight: 94111,52130 Da
isoelectric point:4,61427
aromaticity:0,07567
hydropathy:-0,30687

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR83717.1
1 859
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9923
Central domain 173 415 244 0,1569
C-terminal 416 859 443 0,3721
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-415
C-terminal
416-859

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.039.O._10N.286.55.A2
[NCBI] 		1881299 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83717.1 [NCBI]
Genbank nucleotide accession
MG592423 [NCBI]
CDS location
range 15761 -> 18340
strand +
CDS
ATGTTGAATACGTTCACGGAGCAGAACATGACATCGATCAATAAACTTACCCAAACGCCAACGCTGGAAGATAACGACCTTTCCGTTGTATGGCAGAACTCAAGTGGCCGCACTCGCGCCATTACCATTGAAAACCTACGCCATTTCATCCAATCAACCGATCCAAACGCTGACGCATTCGTAAAGGCTGAGTTGGTTGGTGATGAGCTAATCCTAACCGCACATGATGAGACTGAAACTAGGATTGATATTAATATTCTTCCTGACCATTCAGTTACTGAATTAAAGGACATGCCTGACACTTTGGTTTCCGGTGAGTACCTAAAGGTAAATGATGCCGGTAATGGCTTTGTTTTAACCCCGGCAAGTGAAGCAAGTGCGACCCTTTTAGTTAGGGAGAATGGACAACTAAAGGGGGCCGCTAACGTTCTTGATTTCGGCAACGCCACAATCTCACTCGCAAATAAAATCGCAAACATCAAGCTGAACGTTCAGTTTGCAAACACTAGAACAATGATATTTGATGATAACGAGAAAGAATACTTGTCCGTTGATCGAACGACTCCGGTCATTGTCACTGAAGAAATAGACAGCCTAGTGCTTTGTAAGACTACTGAACCAGAGAGCGAAACTGACGCACCTAAAGTAAGAAAGGCGTCTGTAGGCGAGCTTGCAAGCGGATTCTCTGTATGTCCCGACGGTACATCAGCAGGTACGCAAATACTTCAAGCAAGCTCTGGCACTTACTCACTGACACAGATGACCTTTGCAGTTGGCGCGGCGGTAGATGATTCAGTTTATATTGGCCCTGACGGCAAGCTAACGCTAGACCAATCAGACTATGTTGTTGGATGGGTTCTAACTGATGGTGTGATAATTGATATTGATTTGTATAACGCGACCGTTACAGCCAAATCACAAAGTGAGGATACACCAACCTTCAAGAGTGTTGATATCGACACGGCAGGAAGTGGAAACTCTAACTTTGCTGCGTCTATTCATCAAGATGGCGAGCTACATACCATAATCGATGCAACTCGCGAACTAAGAATTAAATACAAGGATATAAGCACAGGAGACACAACAACTGTAGCCGGAATAGACAATAATCAGGCTCAGTTCTTAGTGCCAATCCTTCAGGGTGTTGACCCTGTAGCGCTTAAAAAAGATATACCTGATACAGACGACCTTGCCAGAAAGAGCCAGCCTAACGCATTTACCGAAAGCCAAACTATTAATAACGCTGAGTTTAAGGTGAGGGATGGTGAAGGCTCTAGCATTTTCAGAGTGAGACCAGATAACAATACGGTTGTAAGCAATGTGCCAGTTAAAGTTAATGATAAATTAGAGTGCGCTGAGTTAATTACACGCATAGTTAATTCACCGGATAACATTGTAAACCTGAAAGCTTACGGTAGCACAAATATAAGCATGGGCAGCGAGTACACGCAGACCCAAAAGCCTATGCTGTTTAACAAGATTGTTGAATTCTATGATAATGCTTTATATTACGGTGGCACAACGGAACCTAAGAACCTAATGACAAAGGAGGCGGTCGAGGCGTTAATTCCTGATGACAATGGTGGTGGAGATAGTAATTGGCATCTTTTAAACAAAGTTAGCTATGAAAGTTCAACCGTTAATACCGAGTCAACTGGTCAAGGAACTATTCATGAGTTCCTTGGTTCAGGCTCGACAAGCGCCGTTCATACTCACACGTTTAATGACTCTGGTGTAGTTTGGATTGCTAACTTCCAAGTTTCGAGCGCAAGAGATAAAACAGTAGAGGTTAAATCCTCTGTCAGTAGCGTTGGGATGACCGGCTTTAAAATCCCTGTAAACATGATCACCCGATTTAGCTACTGCAAAGAAACAAATAAAATGTACTCAGAGGCTAGTTACATTAGGCCAGAGCTTATTGATTTCACCCCTAACTCAGACTTTAACGCAAAGTCAGGTTATGACCGTGTATCTAGTGGCGGTGGCTCAACGCACAGGATCGAATACTGGGAAAACGGCACAATCTTCAAGATTTCCAACAGCAAGGTTGAGGTTCATCTACTAGAGGGAATGAACTCAGAAGATAGTAAGCATGGTTATGTTAAGTACATTAACTCGCGCAATGATGACGTTACGTTTGAGTGGTATGACCGAAACGGAAACCGCATTAACAATTCAACAGTTCCGAGCACTTGCCCTGCTAATACGGTTGTTGATATATTCGCTAACTACGATACGGACGATTACTTTTTAACGTTCGGCCAGTCAATAGCGATAAGCGGTAGCGCGCTGGAAGAGATAGTTGTTAATTCAGAGGTGTTTGACCATATTGACATTAGTGGTTTTGATTCTGAAAATACCCAACTTAAAATTGTTAAGAAGTCATTCACGGATAAGGATTTGATATCAATACCCGTGGAGTTACCTGAAGGTTTTGATGTGCTAGTATCTAGTGTAATTTGCAAGGTTAATGGAAGACTGAAAAAACAACCTTTCGAATATCAATATGAAAATGGAATTTTACGAGTCCACTTAAATGAAGTGTGCTCAGGAATTATTATAGCGGAGCTTATCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2090f38d40d7f0d2844552be5997f369b227f06e157104ee8584b6c774d3ab94
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5103
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank