Protein

View in Explore
Genbank accession
UVK63994.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MIKNGVKDVGDIWAPGKTAQVVLAKHPSGQVREAFPVYPYAEKGNDFSVASDIGFLPLSIMEESNMIGATIVNGLYKPRLTNVAAKHIRLCERMYDGNELTVHFTVADLSPIVRPSSVILGANVYGQDAIELKFGSDGFRIQVTDFDNIVSASYPFTFALSTNDAVTVKRLLDVIVVHVNGNYVFAAKDPLLKPNDSQTYVGVSTVSTSTNISSAFSSIRFIGSTFQPDQLLARFDVERRQLAQNTATLVGSFYSAQGGRALVMLNEFGWTNWTNFSVRQVEVNINGQQQLLITNQNGGSTSKELTLAPNSLFEIKAISNAGNASDRVIKEGLVEVYPY
Physico‐chemical
properties
protein length:339 AA
molecular weight: 36988,42490 Da
isoelectric point:5,85830
aromaticity:0,09440
hydropathy:-0,02242

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVK63994.1
1 339
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,2981
Central domain 172 328 158 0,0077
C-terminal 329 339 10 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-328
C-terminal
329-339

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Vardy
[NCBI] 		2927291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVK63994.1 [NCBI]
Genbank nucleotide accession
ON970622 [NCBI]
CDS location
range 20996 -> 22015
strand +
CDS
ATGATTAAAAACGGCGTCAAAGACGTGGGTGATATTTGGGCTCCGGGGAAGACCGCCCAGGTTGTTCTTGCCAAACACCCTAGTGGTCAAGTTCGCGAAGCGTTTCCGGTTTACCCGTATGCCGAAAAAGGAAACGATTTCAGTGTAGCTTCGGACATCGGCTTTCTTCCTCTTTCTATCATGGAAGAATCAAACATGATCGGCGCGACAATCGTCAACGGTTTGTATAAGCCAAGGTTGACAAACGTCGCTGCAAAACATATTCGTTTGTGCGAGAGAATGTACGACGGTAATGAATTAACCGTTCATTTCACCGTAGCAGACCTCTCTCCCATTGTACGGCCGTCCTCGGTTATTTTGGGTGCCAACGTCTACGGACAAGACGCTATTGAACTTAAGTTTGGTAGCGATGGTTTTCGAATTCAGGTAACAGATTTCGATAACATTGTGTCTGCTTCTTACCCGTTCACATTTGCCTTGTCCACCAACGATGCCGTAACGGTCAAGCGTCTGTTGGACGTCATTGTCGTCCACGTCAATGGGAACTACGTTTTCGCGGCAAAGGATCCTTTGCTTAAGCCTAACGACTCCCAGACTTACGTTGGCGTTAGCACAGTCTCAACGTCCACCAACATATCTAGCGCTTTCTCCAGCATTAGATTTATTGGTTCGACGTTCCAACCAGATCAGCTTCTTGCTCGCTTTGATGTTGAGAGACGACAGCTAGCGCAAAATACAGCCACCCTTGTTGGGTCGTTTTACAGCGCTCAGGGCGGACGTGCGCTGGTCATGTTGAATGAGTTTGGCTGGACAAACTGGACGAACTTCAGTGTTCGTCAGGTAGAAGTGAACATCAACGGACAGCAGCAGCTCCTTATTACGAATCAGAATGGCGGAAGCACTTCTAAAGAGCTAACGCTCGCGCCGAATTCGTTGTTCGAGATCAAGGCGATTTCGAATGCTGGTAATGCTTCTGATCGAGTGATTAAAGAAGGCCTCGTAGAGGTCTATCCATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c5bbdfd5964bc6732b263a19f8355e839fc6b2816e9fa1a2c5149a600c9f227
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6869
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50