Protein

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Genbank accession
AAX12063.1 [GenBank]
Protein name
tail protein Pb4
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNVTRRDFTGIDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGARCESEPVDVGVGAPIVYIDTTGEADYCTIELKDNSNANNPWVKYYVGALMPTIMFGGVPIGSYKVRISGQISLPDGVTIDSSGYYEYPNVFEVRYNFVPPAAPINIVFKAARIADGKERYDLRVQWDWNRGAGANVREFVLSYIDSAEFVRTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPDAQDVTDSAVQTFILNESTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPVKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTKSGIWMGMDNVTAKPKLDIGNATQYIRYDGNILRISSEVVIGTPNGDIDIQTGIQGKQTVFIYIIGTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGATGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGSGPVKYDVLTEYKSGAPGTAFTRQWNGSAWTSPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:688 AA
molecular weight: 74790,23460 Da
isoelectric point:5,64118
aromaticity:0,10320
hydropathy:-0,19724

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551
AAX12063.1
1 688
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-667 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAX12063.1
1 688
Domain Start End Length (AA) Confidence
N-terminal 1 410 410 0,8680
Central domain 411 653 244 0,1450
C-terminal 654 688 34 0,9097
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-410
Central
411-653
C-terminal
654-688

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T5
[NCBI] 		2695836 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus T5
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAX12063.1 [NCBI]
Genbank nucleotide accession
AY587007 [NCBI]
CDS location
range 86566 -> 88632
strand -
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTTCTAAATAGCGTCTTAACTGGATATACGTTGGCGTATATCCAGCATTCTATCTACTCTGATTACGACGTTATAGGTAGATCATTTTGGCTTAAAGAAGGCAGCAACGTTACTCGTAGGGATTTCACGGGTATTGATACTTTCTCTGTAACTATTAATAACTTAAAACCTACAACAACTTATGAAGTTCAGGGTGCATTTTATGATTCCATAATAGACTCTGAACTTCTTAATGCACAGATAGGAATTAATCTATCTGATAAGCAAACTTTTAAAATGAAATCAGCACCTAGAATCACTGGTGCTCGATGCGAGTCAGAACCAGTAGATGTTGGTGTTGGAGCACCAATAGTTTATATAGATACTACAGGGGAGGCCGATTATTGCACTATAGAATTAAAAGATAATTCTAATGCCAATAATCCATGGGTTAAATATTACGTTGGTGCACTAATGCCTACTATTATGTTTGGTGGTGTGCCAATTGGATCCTATAAGGTAAGAATTTCTGGTCAAATAAGCCTACCAGACGGTGTTACTATTGATTCATCAGGATACTATGAATATCCTAATGTCTTTGAAGTTAGATATAACTTTGTACCTCCTGCGGCTCCTATTAATATTGTGTTTAAAGCTGCGCGCATAGCAGACGGTAAAGAGCGTTATGATTTACGTGTGCAGTGGGACTGGAATAGGGGTGCGGGTGCTAATGTTCGTGAGTTCGTTCTATCTTATATAGATTCGGCAGAGTTTGTAAGAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGGGCTGCTCAGTCGGCAACAATTATATCATTCCCGTGGAAAGTAGAGCATAAATTTAAAGTGTCATCTATTGCCTGGGGACCAGATGCTCAAGATGTTACTGATTCCGCAGTACAGACATTTATATTAAATGAGAGTACACCATTAGACAATAGTTTTGTTAATGAAACTGGTATCGAAGTAAACTATGCGTACATTAAGGGTAAAATTAAAGATGGATCTACCTGGAAACAAACTTTCTTAATTGACGCTGCAACTGGTGCTATTAATATAGGTCTTCTAGACGCAGAAGGAAAAGCACCAATATCCTTTGACCCTGTTAAAAAGATAGTTAACGTTGATGGGAGTGTAATAACTAAAACTATTAATGCTGCTAACTTTGTCATGACTAATTTAACCGGTCAAGATAACCCAGCAATTTATACACAGGGTAAAACTTGGGGCGATACAAAATCCGGTATCTGGATGGGCATGGATAATGTTACTGCTAAACCAAAATTAGATATTGGTAATGCTACACAGTATATTCGTTATGATGGTAATATACTTAGGATCTCTAGTGAGGTTGTAATTGGTACCCCAAATGGTGATATTGATATACAGACGGGTATACAAGGGAAGCAAACAGTATTTATCTATATTATAGGTACTTCATTACCTGCTAAACCAACAAGTCCTGCATACCCACCTTCTGGTTGGTCTAAAACTCCACCAAATAGAACATCTAATACTCAGAATATTTACTGTTCTACAGGTACTCTGGACCCAGTTACTAATCAATTAGTATCGGGAACTAGTTGGTCTGACGTAGTTCAATGGAGTGGTACAGAAGGTGTTGATGGCAGGCCGGGGGCTACAGGACAACGTGGTCCTGGAATGTATTCTCTTGCTATTGCTAATTTAACAGCATGGAATGACTCACAAGCTAATTCATTTTTTACATCTAATTTCGGCAGTGGTCCTGTTAAATATGACGTATTAACTGAATATAAGAGTGGTGCTCCTGGGACAGCTTTTACTAGACAGTGGAATGGTTCGGCGTGGACTAGCCCTGCAATGGTTTTACACGGAGATATGATAGTTAATGGCACGGTAACTGCTAGTAAAATTGTTGCTAACAATGCTTTCTTATCACAAATTGGTGTAAATATTATATATGATCGTGCAGCAGCACTATCCTCTAACCCAGAGGGATCCTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

1 / 5
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage T5 Wang,J., Jiang,Y., Vincent,M., Sun,Y., Yu,H., Wang,J., Bao,Q., Kong,H. and Hu,S. 2005 15661140 GenBank