Protein

View in Explore
UniProt accession
A0A8S5LFY6 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MAIYYGDSNGKAQRIVVTGMQGPAGPQGPAGQGVPAGGTAGQVLTQSNDGPVWADSTALGAVIQTNSEFRVYQKGSLITVVANGTFSKSTSVITENAASVGTPYFTNTVNVPPPHVVLQYFLSGTISVTGGNLFMIIWSCEINIDGKVRIRATYANGNSSVTGTPTFTYNVWPGTILGQYLID
Physico‐chemical
properties
protein length:183 AA
molecular weight: 19083,22560 Da
isoelectric point:6,54134
aromaticity:0,09290
hydropathy:0,06339

Domains

Domains [InterPro]
DC_0814
STR
4–180
DC_0814
A0A8S5LFY6
1 183
Architecture
STR
STR 4-180 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctHP32
[NCBI] 		2823539 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD68831.1 [NCBI]
Genbank nucleotide accession
BK014710 [NCBI]
CDS location
range 17156 -> 17707
strand +
CDS
ATGGCAATCTATTACGGCGACAGCAACGGCAAGGCACAACGGATTGTGGTGACTGGTATGCAGGGCCCGGCGGGACCGCAGGGGCCGGCTGGGCAGGGTGTTCCTGCCGGAGGAACCGCAGGGCAGGTGCTGACGCAAAGCAATGATGGACCGGTGTGGGCGGATAGTACAGCACTTGGGGCTGTAATTCAGACAAACTCTGAATTTAGAGTATATCAAAAAGGAAGTTTGATTACAGTAGTTGCAAACGGAACATTCAGTAAATCCACAAGTGTAATAACCGAAAATGCAGCATCAGTAGGTACACCTTACTTTACTAATACTGTAAATGTGCCTCCGCCTCATGTAGTATTGCAGTATTTTCTATCCGGAACAATATCAGTAACTGGTGGAAATCTGTTTATGATCATATGGTCCTGCGAAATAAACATTGACGGGAAGGTCAGAATAAGAGCTACATATGCGAATGGCAATTCATCTGTAACTGGTACTCCCACCTTTACTTATAATGTTTGGCCTGGCACAATTTTGGGGCAATATTTAATTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6af05fe0a2bc1f98162d99a191d45acc8477311d67a5b493f5fedfd3285def0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4916
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50