Protein

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Genbank accession
AVR76072.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKQEILEKLPKTGEFRFFFYKKDGTVREAYATLDPSVISEYWQPKGGGYEEAEDVIRYFDLEALAWRSFKVENFIDVALW
Physico‐chemical
properties
protein length:80 AA
molecular weight: 9507,65460 Da
isoelectric point:4,78319
aromaticity:0,18750
hydropathy:-0,43375

Domains

Domains [InterPro]
IPR024401
STR
6–75
IPR024401
AVR76072.1
1 80
Architecture
STR
STR 6-75 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AhSzw-1
[NCBI] 		2138299 Uroviricota > Caudoviricetes > Demerecviridae > Shenzhenvirus AhSzw1 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR76072.1 [NCBI]
Genbank nucleotide accession
MG676225.1 [NCBI]
CDS location
range 20994 -> 21236
strand -
CDS
ATGAAGCAGGAAATTCTTGAGAAGCTCCCTAAAACTGGGGAGTTTAGATTCTTCTTCTACAAAAAAGATGGCACAGTTCGAGAAGCCTACGCCACTCTAGACCCCTCAGTAATTTCAGAGTATTGGCAGCCTAAGGGCGGTGGGTATGAAGAGGCTGAGGACGTTATCCGGTATTTTGATTTAGAGGCTTTAGCTTGGCGAAGTTTCAAAGTGGAGAATTTTATTGATGTAGCTTTATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
064c78c53a1588129675f7b08a6ebd2c2574d35a40e4baac85e37fadaa14dc4f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8595
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of T5-related Aeromonas hydrophila phages AhSzq-1 and AhSzw-1 and proposal to be two new species Yuan,S., Chen,L. and Ma,Y. 2018-03-19 — GenBank