Protein

View in Explore
Genbank accession
YP_009901206.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MHLPNGSQIFIGVNMGEPISATQISNADNPVFTTENTQSIQKGAYVLIETSSWGKLVSRVLRVKEVSDNASVTLEGVDTTDQNVFPAGSNTATFREVKSWVEIPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEMETVSLSVSLKGRFTFLPSDVK
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24471,11450 Da
isoelectric point:4,54873
aromaticity:0,09091
hydropathy:-0,32409

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
YP_009901206.1
1 220
Architecture
ATT
TAS
ATT 1-50 | TAS 51-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009901206.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,7956
Central domain 24 209 187 0,0613
C-terminal 210 220 10 0,5816
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage tonnikala
[NCBI] 		2696452 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus tonnikala
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009901206.1 [NCBI]
Genbank nucleotide accession
NC_049817 [NCBI]
CDS location
range 33935 -> 34597
strand +
CDS
ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAATATGGGTGAGCCAATTAGCGCGACTCAAATCAGCAATGCTGATAATCCTGTTTTTACAACCGAAAACACTCAAAGCATCCAAAAAGGCGCTTATGTTCTTATTGAAACATCTTCCTGGGGCAAACTGGTTAGTCGTGTGTTGCGAGTAAAGGAAGTATCTGATAACGCAAGTGTAACTCTTGAAGGAGTAGATACAACCGATCAGAACGTGTTTCCGGCTGGTTCTAATACAGCAACCTTCCGAGAAGTAAAATCATGGGTAGAGATTCCTTGCGTACAGGATCTTGCGCAGGACGGAGGCGAGCAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAGGAGCAGCAGTTACCGACATACAAGAGCGCAGTTTCTCTTACCTACACCTTCGCGCATGAATATGATAATCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTAACCGCTTTGCGTATGTACGTTCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTATTGTCCTTTAATGACATTCCGCAAACCACTATGAACGAAATGGAAACTGTTTCCCTTTCCGTATCTCTGAAAGGTCGATTCACGTTCTTACCTTCTGACGTTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df46ab740d590f8504bbcd272ce2b1cddd5dcc5bb90231e03b10cc41def93dec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50