Protein

View in Explore
Genbank accession
XDG30798.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDAIVSLVPVYTSTPTKYSISDKSVISNHVVKNNPTLSLTGFVGRHPIKSYSDSIVGYADLEQRPISTHDKLLEWFQNSTKLFIYSEFFQFNGYVVTSYQPKQLDVTDTLQFDLQLEYIRHVSYERGTLLEFADTTKTVDGKSKTSSSGSEKKVEEDRGWFEISRQIFEFYSDNGILDGQGGNNDN
Physico‐chemical
properties
protein length:186 AA
molecular weight: 21137,15130 Da
isoelectric point:5,06046
aromaticity:0,12366
hydropathy:-0,50968

Domains

Domains [InterPro]
IPR048494
ATT
1–128
IPR048494
DC_0628
STR
1–168
DC_0628
XDG30798.1
1 186
Architecture
ATT
STR
ATT 1-128 | STR 129-168 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage P018-4
[NCBI] 		3229728 Uroviricota > Caudoviricetes >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDG30798.1 [NCBI]
Genbank nucleotide accession
PP934186.1 [NCBI]
CDS location
range 19001 -> 19561
strand -
CDS
ATGGACGCTATCGTAAGTCTCGTCCCTGTTTACACATCTACTCCGACAAAATACAGTATATCCGATAAAAGTGTTATCAGCAACCACGTTGTTAAGAATAACCCTACATTAAGTTTAACAGGTTTTGTAGGTAGGCACCCTATCAAGTCTTATTCTGACTCTATTGTTGGTTATGCAGATTTAGAACAACGGCCTATATCTACACACGATAAACTTCTAGAATGGTTTCAAAACTCAACTAAGTTATTCATATATAGTGAGTTTTTTCAGTTTAACGGGTATGTTGTAACATCCTATCAACCGAAGCAATTAGATGTGACAGATACTCTTCAATTTGATTTACAATTAGAATATATCCGACATGTATCCTATGAAAGGGGAACCCTTTTAGAATTTGCTGATACAACAAAAACAGTGGATGGTAAAAGTAAAACATCTTCAAGTGGAAGCGAGAAAAAAGTAGAAGAAGATAGAGGTTGGTTTGAGATATCAAGGCAGATATTTGAGTTTTATTCCGATAACGGAATTTTAGATGGTCAAGGAGGTAATAATGACAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3f6f67e3eef2b3270b53520730f2cc27e58b7ee8d2edd68e9d74f162ea47e853
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50