Protein

View in Explore
Genbank accession
XSB42796.1 [GenBank]
Protein name
side tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MAAVKISGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEYGQYSVTLLVEGFPPSHAGTITVYEGSRPGTLNDFLGAMTEDDVMPEALRRFEAMVEEAARNAEAASQSAAAAKKSETAAASSKNVAKTSETNAANSAQAAATSQTASANSATAAKKSETNAKNSETAAKTSETNAKSSQTAAKTSETNAKASETAAKNSQVAAAESESAAAGSATSAAGSATAAANSQKAAKTSETNAKSSQTAAKTSETNAKASETAAKSSQDAAAQSESAAAGSASAAASSATASANSQKAAKTSETNAKASETAATNSAKASAASQMAAKASEDAAREYASQAAEPYKQVLQPLPDVWIPFNDSLEMITGFAPGYKKITVGDDVITMPSDKVVNFKRASGATYINKAGVLTIADVDEPRFEKDGLLIEGQRTNYFINSNSPELWNPNPGLEISKTKTDPLGFKYATFKPGEFSGGTGAYTVIAGLTPNKIPVVKNDMVTISFRAKGNNVRFGARFDKGDPLSAVAIAYIDCDSLGIHLSGGDIENIVAKNAVRVGEWVFVEVVYKITDETTHVRGVITIANKTGGGILDETSFMDLTTPQIEVGSCASSFIITEGSPTTRASDQVIIQIPMNWATPPICALMEVNVNWGAVNKMPNIEGSARLLNVSITGATTDVADESYMYFGFTSGGNRLIITNGKGTKTEYKAYGDRVENKFIAGFRFTAEKNLQVVVDGVFGTESPSLWTKQRYIAGSINIGGQAASGNRHLFGHVRNLRIWHKELTEAQMGESIK
Physico‐chemical
properties
protein length:799 AA
molecular weight: 83512,90400 Da
isoelectric point:5,95317
aromaticity:0,06133
hydropathy:-0,31727

Domains

Domains [InterPro]
IPR013609
ATT
3–132
IPR013609 DC_1416
IPR008969
ATT
5–82
IPR008969 Coil
G3DSA:2.60.40.1120
STR
6–99
G3DSA:2.60.40.1120 DC_0608
PTHR10825
Unmapped
120–342
PTHR10825
XSB42796.1
1 799
Architecture
ATT
STR
ATT 3-245 | STR 321-799
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSB42796.1
1 799
Domain Start End Length (AA) Confidence
N-terminal 1 617 617 0,3768
Central domain 618 788 172 0,4121
C-terminal 789 799 10 0,9938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-617
Central
618-788
C-terminal
789-799

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PhiR46_1
[NCBI] 		3416487 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB42796.1 [NCBI]
Genbank nucleotide accession
PV340565.1 [NCBI]
CDS location
range 39561 -> 41960
strand +
CDS
ATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTGGCTTCTGAAAATCCGGATGAAGCCGGACGTTACAGCATGGATGTTGAGTATGGCCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGGACCATTACCGTCTATGAAGGTTCCAGACCAGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAAGATGATGTCATGCCGGAGGCATTGCGCCGTTTTGAGGCAATGGTGGAAGAAGCGGCACGCAACGCCGAAGCCGCCTCTCAGAGCGCAGCGGCGGCAAAGAAATCCGAAACTGCAGCGGCATCATCGAAGAACGTGGCGAAAACCTCAGAAACGAATGCAGCTAACAGCGCACAGGCGGCAGCGACCTCGCAGACTGCATCGGCAAACTCCGCGACAGCAGCCAAAAAATCAGAAACCAACGCGAAAAACAGCGAGACAGCCGCAAAGACGAGCGAAACCAACGCAAAGTCCAGCCAGACGGCAGCGAAGACCAGCGAAACGAATGCCAAAGCCAGTGAAACTGCGGCAAAAAACAGCCAGGTTGCAGCAGCTGAAAGCGAGAGTGCCGCTGCCGGTTCTGCGACTTCAGCTGCTGGATCAGCAACTGCTGCGGCTAACAGCCAGAAAGCTGCGAAGACGAGTGAAACTAACGCAAAGTCCAGCCAGACGGCAGCGAAGACCAGCGAAACGAATGCCAAAGCCAGCGAAACTGCGGCGAAAAGCAGTCAGGATGCAGCGGCCCAAAGCGAGAGTGCTGCAGCTGGTTCTGCAAGTGCGGCGGCTTCTTCTGCCACTGCATCAGCCAACAGTCAAAAAGCTGCAAAAACCAGTGAAACCAACGCAAAGGCGAGCGAGACTGCGGCGACTAACTCGGCAAAAGCATCCGCTGCAAGCCAGATGGCTGCAAAAGCAAGTGAAGACGCAGCCAGAGAGTATGCAAGCCAGGCAGCGGAGCCGTATAAACAAGTTTTGCAGCCGTTGCCTGATGTGTGGATACCGTTTAACGATTCACTGGAAATGATTACTGGTTTCGCTCCTGGTTACAAAAAAATAACTGTTGGCGATGATGTGATCACAATGCCATCAGATAAGGTTGTCAACTTTAAGCGCGCATCCGGTGCAACTTACATAAATAAAGCTGGCGTGCTTACTATTGCAGATGTTGATGAACCTCGATTTGAAAAGGATGGTTTACTGATCGAAGGTCAGAGAACTAACTATTTCATAAATTCAAACTCACCGGAGTTATGGAATCCAAACCCAGGGCTTGAAATAAGCAAAACAAAGACCGATCCATTAGGCTTTAAATATGCAACATTCAAGCCAGGAGAATTTTCTGGTGGTACTGGTGCATATACTGTCATTGCAGGACTGACACCAAATAAAATACCAGTTGTAAAAAATGATATGGTAACTATATCTTTCAGAGCGAAAGGGAATAATGTTAGATTTGGTGCAAGATTTGATAAGGGCGATCCTCTATCTGCTGTAGCAATTGCATACATTGATTGCGATAGTCTAGGTATTCATTTGTCCGGTGGCGATATAGAAAATATTGTTGCAAAAAATGCGGTTCGTGTTGGTGAGTGGGTTTTTGTAGAGGTTGTGTATAAAATAACAGATGAAACAACTCATGTTAGAGGTGTTATTACAATTGCCAACAAAACAGGTGGTGGTATTCTTGATGAAACTAGCTTTATGGATCTTACAACCCCTCAGATTGAGGTTGGCTCGTGTGCATCATCATTCATAATAACAGAAGGATCACCAACAACAAGAGCTAGCGATCAGGTGATTATCCAAATTCCTATGAACTGGGCAACTCCACCGATATGCGCTCTTATGGAAGTCAATGTTAATTGGGGTGCTGTCAATAAGATGCCGAACATAGAAGGTTCAGCAAGGCTTCTTAACGTGTCAATAACTGGCGCAACAACGGATGTTGCTGATGAAAGTTATATGTATTTTGGTTTTACCTCTGGAGGAAACAGATTAATTATTACAAACGGTAAGGGAACAAAAACAGAATATAAAGCATATGGAGATAGAGTTGAGAATAAATTTATTGCTGGATTCAGGTTTACAGCAGAAAAAAACTTACAAGTTGTTGTTGACGGCGTGTTTGGTACTGAGTCGCCTTCATTGTGGACTAAGCAACGATACATTGCAGGAAGCATAAATATAGGTGGTCAGGCAGCTTCAGGAAATCGCCATCTTTTCGGACATGTTAGAAACCTGCGAATCTGGCATAAAGAATTAACTGAGGCACAAATGGGGGAGAGTATTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c2093e277025b38e54cc10b5884ac06b2ea2ed8bf2aff5efe56b715bb9e5f84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7521
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages Brenes,L.R. and Laub,M.T. 2025 — GenBank