Protein

View in Explore

Genbank accession

XPQ57450.1 [GenBank]

Protein name

tail fiber

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,69

Protein sequence

MPTITVLVAPEVVRNKPETERLHVVTGTAKGWEKTSLNQDPDEVLTECKGLDALLTRSNLQADGVTKVDPTKPVGFQLTYEIHDPSAVLTTGLTITPATASGEIGQVVELLATVAPANATYQGVNWYSGDLTKAVHIGGGKFKLLASGSVTVYGVTIEGNHTDSTVITVAGALSLSTDLPATKDVTAEQDGTFSVVAAGGTTPYTYVWHFSDVPGGAGVVIDAGANATAATANLVITAVDAADEGEYWCVVSDADGHSVTSTRCEMAVV

Physico‐chemical properties

protein length:	269 AA
molecular weight:	27789,74900 Da
isoelectric point:	4,49724
aromaticity:	0,05576
hydropathy:	0,10632

Domains

Domains [InterPro]

DC_0400
STR
2–269

DC_0400

G3DSA:2.60.40.1080
STR
86–170

G3DSA:2.60.40.1080 IPR013783

IPR003343
STR
91–162

IPR003343 IPR036179

IPR003599
STR
97–269

IPR003599

IPR007110
STR
180–260

IPR007110

cd00096
STR
200–262

cd00096

XPQ57450.1

1 269

Architecture

STR

STR 2-269

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0400	STR	DC_0400	2	269	Novel HMM	DC_0400	Central	Low	Positional only	137 proteins / 137 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	86	170	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	91	162	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR003599	STR	DC_0008	97	269	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR013783	STR	IPR013783	176	267	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036179	RBD	IPR036179	180	262	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
IPR007110	STR	DC_0008	180	260	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
cd00096	STR	DC_0826	200	262	InterPro cluster	Ig	C-terminal	Low	Positional only	1 proteins / 1 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Yersinia phage CAU_YEP3 [NCBI]	3398731	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Yersinia enterocolitica [NCBI]	630	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XPQ57450.1 [NCBI]

Genbank nucleotide accession

PQ863687.1 [NCBI]

CDS location

range 100659 -> 101468
strand +

CDS

ATGCCAACGATCACTGTATTAGTCGCCCCGGAAGTTGTTCGCAACAAACCGGAAACCGAACGCCTGCATGTTGTTACAGGCACTGCCAAGGGTTGGGAGAAGACCAGTCTGAACCAAGACCCTGACGAAGTGCTGACCGAGTGTAAAGGCCTGGACGCTCTGCTGACCCGCAGTAATCTGCAGGCCGATGGCGTCACCAAAGTGGATCCAACCAAGCCTGTTGGCTTCCAGCTGACTTACGAAATCCACGACCCAAGCGCTGTGCTGACCACTGGTCTGACCATCACTCCGGCGACAGCGAGCGGTGAAATCGGCCAGGTTGTTGAGCTGCTGGCCACCGTAGCCCCAGCGAACGCAACCTATCAGGGTGTCAATTGGTACTCTGGTGATCTGACTAAAGCCGTACACATCGGCGGCGGTAAATTCAAGCTGCTGGCATCCGGCTCGGTAACAGTCTATGGCGTGACCATCGAGGGCAACCATACTGACTCTACCGTCATTACAGTGGCTGGCGCTCTGTCGCTGTCTACTGACCTGCCTGCCACCAAAGATGTAACGGCTGAACAGGACGGAACCTTCAGCGTTGTAGCTGCGGGTGGTACAACCCCATACACCTACGTGTGGCACTTCTCTGACGTCCCTGGCGGCGCTGGTGTGGTTATTGATGCAGGCGCTAACGCAACTGCCGCAACTGCCAACCTGGTCATCACTGCTGTTGACGCAGCCGACGAAGGTGAATACTGGTGCGTTGTTTCCGACGCCGACGGTCATTCTGTGACCTCTACCCGTTGTGAAATGGCTGTGGTCTAA

Genome Context

Tertiary structure

PDB ID

3cb526ecb0fcf0243368ea530175623d260e27bdaef67570f46ba1582b3054a4

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7253

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence