Protein

View in Explore
Genbank accession
QQV87930.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MFARNANKKDGDLIYDYYTGSQNDITNNRKVSIKIDKLGINTPDIVSISMTTNGSEKLTVKTDTLDPVENTYESADMTYIHTPVSKIVGDVLYSNISQAIKSIHLLENNICSLKPASMELQLVRLKELNQTINNMLQSMFDESPIALENGDYIDVSFSGSASYGTGYCGYVNIKDTIRDITYKAYKVSSNAFNTTSGTKVIAVLTSDNSKTNVTYSDSVSTLESYEVAENEILLEISFSTAKQYSAKYGYGAMLEYWGSVSDLCYDYYMGSNLDMNCPFKITILKLGSSVKADTIQIGAPTFAGSLVMHLRKNTNDVINFLVSTGMNVTGRDGTESGSVYNLVEKSLKPLKVLTSEAHQSINGITTFNNKVYMNIENERITDNKQLIHKEYLDKNITDNVAYNISNTPLIPYTDVSSLNKKKISVRISATTNNSNYSSGDTVVVSNFKIKLKGDDEYLKPYGVEVIDRENNKIGLNLIGDDTVYNDNDALLSTRPSDFNSSSVDLSSGSNALVTVKTNGAYDYSGVYDIPNPFREYNKKYSLFLSNDGLKNPYYQVDINSSKQVDNISFQLFGTSATNPFLYSKDCKIELFIENTVVKTFNVKGSSDNNNPVNINIDYKDGMFLISVLDSINYINNRINKNAELLTGSGKPNFSLNPNKIGSLYSDTTNKAVYMCIDNAFGANKWVNIVTGDEIKPSLRKIEITCNVKLRSGQYGGCMSGVKIGFDNGYASTKQIVKGLNSGQILLSLDGLGNLSGYSEVSSLTPSGQDIKVDVDTTGIYNDPSYHCVTNIFKEYLGNADQCSLWSDASVKQLKITLLSEKIPTKILYVGNGYYGQTSVSDVKAVWYYVNDSGDKIEGNVDNDLKVSNNVSETNDSSYIYAFNIN
Physico‐chemical
properties
protein length:885 AA
molecular weight: 97700,21020 Da
isoelectric point:5,09058
aromaticity:0,09379
hydropathy:-0,34090

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV87930.1
1 885
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2540
Central domain 11 646 637 0,6650
C-terminal 647 885 238 0,3121
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-646
C-terminal
647-885

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-7
[NCBI] 		2781360 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV87930.1 [NCBI]
Genbank nucleotide accession
MW057933.1 [NCBI]
CDS location
range 100286 -> 102943
strand +
CDS
ATGTTTGCTAGAAACGCTAATAAAAAAGACGGAGACTTAATATATGATTATTATACTGGAAGTCAAAATGATATAACAAATAATAGAAAAGTATCTATAAAAATAGATAAACTTGGTATTAATACTCCAGATATTGTAAGTATATCTATGACTACAAATGGTTCTGAAAAATTAACTGTAAAAACAGATACACTAGATCCTGTAGAAAATACATACGAATCTGCGGATATGACTTATATTCATACTCCTGTCAGCAAAATTGTAGGAGATGTTCTGTATAGTAATATATCTCAAGCAATAAAATCAATACATTTATTAGAAAATAATATATGTTCTTTAAAGCCTGCAAGTATGGAATTACAACTTGTAAGACTCAAAGAACTTAATCAAACAATAAATAACATGTTGCAATCTATGTTTGATGAGAGTCCTATAGCACTAGAAAATGGAGATTACATAGATGTTTCATTTAGTGGTAGTGCAAGTTATGGAACAGGATATTGTGGGTATGTTAATATAAAAGATACTATAAGAGATATTACATATAAAGCTTATAAAGTATCTTCAAATGCTTTTAATACAACTAGTGGAACTAAAGTTATTGCAGTTCTCACTTCTGATAACAGTAAAACAAATGTAACTTATTCCGATAGTGTATCAACATTAGAATCTTATGAAGTAGCAGAAAATGAGATATTATTAGAAATATCATTTTCAACTGCTAAGCAATATTCTGCTAAATACGGATATGGAGCTATGCTAGAATATTGGGGTTCTGTATCTGATTTATGTTATGATTATTATATGGGTTCAAACCTAGATATGAACTGTCCATTTAAAATAACAATACTAAAACTAGGAAGTTCTGTTAAAGCTGATACTATACAAATAGGTGCTCCTACTTTTGCAGGATCATTAGTTATGCACCTAAGAAAAAATACAAACGATGTTATTAATTTCCTTGTATCTACAGGTATGAATGTAACAGGAAGAGATGGGACTGAAAGTGGATCAGTATATAATTTAGTAGAAAAATCATTGAAACCATTAAAAGTTCTAACATCTGAAGCACATCAATCTATAAATGGTATAACTACTTTTAATAATAAAGTGTATATGAATATAGAAAATGAAAGAATTACAGACAACAAACAACTAATACATAAAGAATACCTAGATAAAAATATTACAGATAATGTAGCATATAATATTAGTAATACTCCATTAATACCTTACACTGATGTTAGTTCTTTAAACAAAAAAAAAATATCTGTAAGAATATCTGCGACAACTAATAACTCTAATTATTCATCTGGTGATACAGTAGTAGTTAGTAATTTCAAGATAAAACTTAAAGGAGATGATGAGTACCTTAAACCTTATGGGGTTGAAGTTATTGATAGAGAAAATAATAAAATAGGTTTAAATTTAATAGGAGATGATACAGTATATAATGATAATGATGCTTTATTATCTACAAGACCTTCTGATTTTAATTCATCTAGTGTAGATCTTTCTAGTGGAAGTAACGCCTTAGTAACTGTTAAAACTAATGGAGCTTATGATTATAGTGGAGTTTATGATATACCAAATCCTTTTAGAGAATATAATAAAAAATACTCTTTATTCTTAAGTAATGATGGGTTAAAAAATCCTTATTACCAAGTTGATATAAATAGCTCCAAACAAGTTGATAATATATCTTTTCAATTATTTGGAACTAGTGCTACAAATCCTTTTTTATATTCTAAAGACTGTAAAATTGAATTATTTATAGAAAATACTGTTGTAAAAACCTTCAATGTTAAAGGAAGCTCTGACAATAATAATCCTGTAAATATTAATATAGATTATAAAGATGGTATGTTCTTGATATCTGTTCTTGATTCTATAAATTACATAAATAATAGAATTAATAAAAATGCAGAATTACTTACAGGGTCAGGCAAACCTAATTTTTCATTAAACCCTAACAAAATAGGTTCTCTATACTCTGATACAACTAATAAAGCTGTATATATGTGTATAGACAATGCTTTTGGTGCTAATAAATGGGTGAATATAGTAACAGGGGATGAAATTAAACCAAGCCTTAGAAAAATAGAGATCACTTGTAATGTAAAATTAAGAAGTGGCCAATACGGTGGTTGTATGAGCGGTGTTAAAATAGGATTTGATAACGGGTATGCTTCTACAAAACAAATAGTTAAAGGGTTAAATAGCGGTCAAATATTGCTATCTCTAGATGGGTTGGGTAACCTTTCTGGGTATTCTGAAGTTAGTTCTTTAACTCCTAGCGGTCAAGATATAAAAGTTGATGTGGATACTACTGGGATATATAATGACCCTTCATATCATTGCGTTACTAATATATTTAAAGAATACCTTGGCAATGCTGATCAATGTTCGCTATGGTCTGATGCTAGTGTTAAACAGCTTAAAATAACGTTATTGTCTGAAAAGATTCCTACCAAAATATTATATGTAGGAAACGGATATTATGGTCAAACATCTGTTTCTGATGTAAAAGCTGTATGGTATTATGTAAATGATAGCGGAGACAAAATAGAAGGTAATGTAGATAATGATTTAAAGGTAAGTAATAATGTTTCTGAAACAAACGATAGTTCTTATATATATGCGTTCAATATAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
745dbc36f56de7e189cee436273b44da038965b7d54d8fb01074b3f54ed3dbfe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2875
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank