Protein

View in Explore
Genbank accession
BCG50054.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MSLNRGEGGLLLPPGGLVNKIINGDMDIWQRGTSFTNSSSGGYQYTADRMFVANPAGSGSTTISQSTNTPDNIGYSLSLVSTFAAANLQYRIESLDCYDLIGKTVTLQFQYYVGDNTGAQLTLNIYTPTAVDNYAGANNLVGYPQYVDAAPQSGIWKTAAIQFVVPASAINGLGFSLSRNNTQGTSVTTLFDRMQLVLGKTNLAWQRRLYSHEFALCQRYYQADTFHCGGAPVSAGVGSTAIASNTTVIQGHKPLPVAMRVQPTMVFKDLGGNVGTYTFFSNSQTNGNTMSSGGFSAPSNTFVDMDASTGSAIVTWCRVTYTLSAEIF
Physico‐chemical
properties
protein length:328 AA
molecular weight: 35036,77000 Da
isoelectric point:6,26720
aromaticity:0,10671
hydropathy:-0,07287

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP13
[NCBI] 		2743402 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCG50054.1 [NCBI]
Genbank nucleotide accession
LC554890.1 [NCBI]
CDS location
range 17944 -> 18930
strand -
CDS
ATGTCTCTTAATAGAGGTGAGGGAGGTCTATTGTTACCTCCTGGTGGTCTTGTTAACAAGATCATCAATGGTGATATGGATATTTGGCAGCGTGGTACTTCATTTACTAATTCTAGTAGTGGCGGTTACCAATATACTGCTGATAGAATGTTTGTGGCCAATCCTGCTGGATCAGGCTCTACTACTATATCACAGTCCACGAATACTCCTGATAATATTGGATATTCATTAAGTCTCGTATCTACATTTGCTGCAGCTAATCTTCAATATAGAATTGAATCACTTGATTGCTATGATCTAATTGGAAAGACTGTAACACTACAATTTCAATATTATGTTGGTGATAATACAGGTGCTCAGCTTACATTAAATATTTATACTCCAACTGCAGTAGATAATTATGCTGGTGCTAATAATCTAGTTGGATATCCACAATATGTAGATGCAGCTCCACAATCAGGTATATGGAAAACTGCTGCTATACAATTTGTGGTTCCTGCATCAGCTATTAATGGATTAGGATTTAGTTTATCAAGAAATAATACTCAAGGTACATCTGTCACAACACTATTTGATAGAATGCAACTAGTATTAGGTAAAACTAATCTTGCATGGCAGCGTAGATTATATTCTCATGAATTTGCATTATGTCAACGTTATTACCAAGCAGATACATTCCACTGTGGTGGTGCTCCTGTTTCTGCTGGTGTAGGTAGTACAGCTATTGCAAGTAATACCACAGTTATTCAAGGACATAAACCGCTTCCTGTAGCTATGCGTGTTCAGCCTACTATGGTATTCAAGGATTTAGGTGGTAATGTAGGCACATATACATTCTTCTCTAATTCACAAACTAACGGCAACACAATGTCTAGTGGTGGATTTAGTGCACCTAGTAATACTTTTGTAGATATGGATGCTTCAACAGGCTCAGCTATTGTAACTTGGTGTAGAGTAACTTATACTTTATCAGCTGAAATTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc2443befe8e71b59313aba589cec9238d06abc72f127133cb9bdebe199813e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8332
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RP13 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank