Protein

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Genbank accession
QBX32654.1 [GenBank]
Protein name
long tail fiber hinge connector
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANQFMAHFGPSYVETTHFGENNSVKYKLELQGSNLDSTVTTSYVKVNGVSVVPNTLRGITAVTINELGAASNIATFDLYQRPEHFETLRDYLMSAPSNRIIALVSWDAIKSDATFDTFMDQYGAVSWPGVDYLNKAGTSGSFYARSSYAAIFNTTLKRFCYENFVGNNPDRNEDTTAKIEVVFDTVWDIGACGTAERQVDDITEYFSEGGQYEFKKYFYEPISLYGAIYHFKCELYRDQALIDAKGVSRFYLWSQEASGKWINSVSLAADSSTAGEWVWVEGYFKIPENPTTATHWGCAVYRHPSTVKVGKAGCRNVTVTRVTRNADDKVTNAAFGVNGMRSNQIEESADLGNPVMQLLNLKPKNSVTTHELKERQ
Physico‐chemical
properties
protein length:377 AA
molecular weight: 42140,49120 Da
isoelectric point:5,47743
aromaticity:0,12467
hydropathy:-0,36074

Domains

Domains [InterPro]
DC_0912
STR
1–377
DC_0912
PS52031
LEC
23–199
PS52031
QBX32654.1
1 377
Architecture
STR
STR 1-377
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX32654.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,0487
Central domain 172 366 196 0,2843
C-terminal 367 377 10 0,9764
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-366
C-terminal
367-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Asfd_1
[NCBI] 		2562462 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32654.1 [NCBI]
Genbank nucleotide accession
MK577502 [NCBI]
CDS location
range 18317 -> 19450
strand +
CDS
ATGGCAAATCAATTTATGGCCCATTTTGGGCCATCTTATGTCGAAACAACACACTTTGGGGAAAATAACTCTGTGAAATATAAGTTGGAGCTTCAGGGCTCCAACCTTGATTCCACAGTTACAACTTCATATGTGAAAGTTAATGGTGTCAGTGTAGTTCCAAATACTTTGCGGGGTATAACAGCAGTAACAATTAACGAACTTGGTGCTGCTAGCAATATTGCAACATTTGATTTATATCAACGACCAGAACATTTTGAAACGCTTAGGGATTATTTGATGTCTGCTCCGTCCAACCGGATTATCGCGTTGGTTTCATGGGATGCTATTAAATCTGATGCAACATTTGACACGTTTATGGATCAATACGGTGCAGTTTCATGGCCTGGCGTTGATTATCTCAATAAAGCTGGCACGAGTGGTTCATTTTATGCGAGAAGCTCATACGCCGCAATTTTCAATACAACATTGAAACGGTTTTGTTATGAAAATTTTGTCGGGAATAACCCCGATAGAAATGAAGATACAACTGCAAAAATTGAAGTTGTTTTTGATACTGTGTGGGATATCGGGGCATGTGGCACAGCAGAAAGACAAGTTGATGATATAACTGAATATTTTTCAGAAGGCGGACAATATGAGTTTAAAAAATATTTTTACGAACCCATCTCGTTATATGGTGCAATATATCATTTCAAATGTGAGTTATACAGAGACCAAGCGCTCATAGATGCGAAAGGTGTTTCACGATTTTATTTGTGGTCGCAGGAGGCTAGTGGAAAATGGATTAATTCGGTCAGCCTTGCTGCAGATTCATCTACAGCTGGTGAATGGGTTTGGGTTGAAGGGTATTTCAAAATCCCGGAAAATCCAACAACTGCAACTCATTGGGGTTGTGCTGTATATCGGCACCCGTCCACCGTTAAAGTCGGAAAAGCTGGTTGCCGAAATGTTACTGTAACCAGAGTAACACGGAACGCTGATGATAAAGTCACTAATGCTGCGTTTGGTGTTAATGGTATGAGATCAAATCAAATTGAAGAATCGGCTGACTTAGGTAATCCGGTTATGCAACTCTTGAATCTTAAACCTAAAAACTCCGTTACAACTCACGAACTCAAAGAAAGACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7edffb55d0dd8202735364146b9e0cd54e17e1f8176e8e2c2802d0a4f4a2ff4d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel lytic T4-like bacteriophage Asfd-1 combating Aeromonas Salmonicida Zhou,Y., Yuan,S. and Ma,Y. 2010-12 — GenBank