Protein

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Genbank accession
XCO39814.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MLPKFNQPKGSTIGVLKDGRTVQQAIDDTVALPHVSPMWQKVRSAMDDVYIVIMGDSTGNETFEWVYQWAAHLAQTVKTHSIRYRLWVDGSGWQGEERMSTGTTERSIFIDNVSVPGSTERYFQGSATGNIFNSGRVYDLVLLNYGHNEGTSVPSITISAGFTEAIFACRQINPMAPIVVTAQNPRRDFPDHSARAVACWADIAGVNGLGVIDVYSAFIKLGSPSELYIDMIHPNAEGHKVWLEVVKKALSDTPAYQFDKVAEPYSGPLRMNLIPNPAFVTWGVNVPALWEANAVTVTQDLTRCESFAYSVKVTCTDVNSPLLYVDLSDTLTASRGQWVTFAARVWRPSGISTNAGRLQIRGSGMNTVTSRSKANEAENGWMWAVCHAFVPKGVTSLQARFLGGTVVGDSFNVDRVWFGIGKVPSDIDFMGQPAVTLADYYQAENVGVPVGYDTQVSVDGNHIVATPVTSKARFFININYLTPGQTYRVTWSKASPADGYAYARASGGGLGTVLDTVRLSAGTTSTFVAPSKTCSFVMESDGINLLDVTIASIVKV
Physico‐chemical
properties
protein length:556 AA
molecular weight: 60425,60950 Da
isoelectric point:6,01887
aromaticity:0,10072
hydropathy:-0,03993

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_0332 DC_0332
IPR036514
STR
34–252
IPR036514
SSF52266
STR
47–252
SSF52266
IPR051532
Unmapped
50–252
IPR051532
cd00229
ENZ
84–249
cd00229
XCO39814.1
1 556
Architecture
ATT
STR
STR
ATT 1-40 | STR 41-252 | STR 254-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39814.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 46 46 0,6300
Central domain 47 269 224 0,2508
C-terminal 270 556 286 0,9897
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-46
Central
47-269
C-terminal
270-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146035
[NCBI] 		3232215 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39814.1 [NCBI]
Genbank nucleotide accession
PP889485.1 [NCBI]
CDS location
range 36722 -> 38392
strand +
CDS
ATGTTACCAAAATTTAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTGTTCAACAGGCCATTGACGATACGGTGGCCCTACCTCATGTTTCCCCGATGTGGCAGAAGGTTCGCAGCGCAATGGATGATGTGTATATTGTCATCATGGGCGACTCTACAGGGAACGAGACGTTCGAGTGGGTGTACCAGTGGGCCGCTCACCTTGCACAGACGGTCAAGACCCACTCCATTCGGTATCGCTTATGGGTAGATGGCTCAGGGTGGCAGGGAGAGGAGCGAATGAGTACAGGAACAACAGAGCGGTCCATCTTCATTGATAACGTTTCTGTTCCGGGCAGCACTGAGCGTTACTTCCAAGGGTCGGCTACTGGCAACATCTTCAACTCCGGTCGTGTGTATGACTTGGTTCTCCTCAACTATGGACACAATGAAGGGACCAGCGTTCCGTCCATCACCATTAGTGCCGGGTTCACTGAAGCAATCTTCGCGTGTCGCCAGATTAACCCAATGGCACCTATCGTCGTAACAGCACAGAACCCTCGCCGCGACTTCCCTGACCACTCTGCCCGCGCGGTAGCGTGTTGGGCCGATATAGCTGGTGTAAACGGACTTGGTGTTATTGACGTGTACTCTGCGTTCATCAAACTTGGCTCACCATCTGAACTGTACATCGACATGATTCACCCTAACGCTGAGGGTCATAAGGTATGGCTTGAAGTTGTGAAGAAGGCGCTTAGCGATACCCCAGCTTACCAGTTCGACAAGGTGGCCGAACCCTACAGTGGGCCGCTTCGTATGAACCTAATCCCCAACCCTGCGTTTGTGACATGGGGTGTTAACGTTCCGGCGCTGTGGGAAGCCAACGCAGTGACTGTGACTCAAGACCTCACCCGTTGTGAGAGCTTTGCGTACTCAGTCAAGGTAACCTGTACCGACGTAAACAGTCCGCTGCTCTACGTTGACCTCTCGGACACCTTGACCGCCTCTCGCGGCCAGTGGGTAACATTCGCTGCCCGAGTGTGGAGACCTTCTGGTATCTCAACGAACGCGGGCCGCCTTCAGATTAGAGGCAGTGGGATGAATACCGTAACGTCTCGCAGCAAGGCTAACGAAGCGGAGAATGGTTGGATGTGGGCAGTGTGCCATGCGTTTGTGCCAAAGGGGGTCACATCCCTACAGGCTCGCTTCTTGGGTGGTACTGTTGTGGGTGATTCCTTCAACGTTGACCGTGTGTGGTTCGGTATTGGCAAGGTACCTAGCGACATCGACTTCATGGGTCAACCAGCGGTAACTCTGGCAGATTATTACCAAGCCGAGAACGTTGGGGTACCTGTGGGCTACGACACTCAGGTGTCTGTGGATGGTAACCACATTGTGGCAACCCCCGTGACCTCGAAGGCGCGATTCTTCATCAACATTAACTATCTGACACCGGGGCAGACCTACAGGGTCACTTGGTCAAAAGCCTCCCCGGCTGATGGCTATGCTTACGCCCGGGCGTCTGGTGGTGGGCTTGGTACGGTTCTGGATACTGTTCGTCTATCTGCCGGGACCACGAGTACGTTTGTGGCACCGTCTAAGACCTGCTCGTTCGTAATGGAGTCCGACGGTATAAACCTGCTCGATGTAACCATCGCGTCCATCGTTAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fe88876e4bf346aa705ba4a01401de7cbaa1fac385ffcb6482d91c2cfc9322c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7750
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank