Protein

View in Explore
Genbank accession
URN70740.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MKKILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVLYNGILYQAGKVKSISTHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRIVSIHQAIIMEDGSILPVDPDTNGPLLYFRGRITGGGIKDNVSTSGVGTSTITWNCSNQFYDFDRVNGRYTDDASHRGLEVVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPVFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICMDSNDSSARTCFGVKKVAGDTMQRIASGTSSSSPSVHGQEYKYNDGNGDIRIWTYHGKSNQTASEVLVNIAKERGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKIKIYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDPVAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRVTVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNAITFYNSKYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDKKYFLVDEVENSREGKINVTLQEYGEDVFINSEQVDNSSNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWFPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEVIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIHDSQNRMLRSVRIENQYTYDYLLTYNKADFALQNSGALGINRKLYFRIRAEGDDGEQSVEWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107000,21180 Da
isoelectric point:5,23040
aromaticity:0,11275
hydropathy:-0,42392

Domains

Domains [InterPro]
DC_0187
STR
228–948
DC_0187
IPR032876
ATT
597–696
IPR032876
URN70740.1
1 949
Architecture
STR
ATT
STR
STR 228-596 | ATT 597-696 | STR 697-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URN70740.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9289
Central domain 313 526 215 0,4171
C-terminal 527 949 422 0,0043
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-526
C-terminal
527-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC104
[NCBI] 		2936939 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URN70740.1 [NCBI]
Genbank nucleotide accession
ON185581.1 [NCBI]
CDS location
range 86386 -> 89235
strand -
CDS
ATGAAGAAAATACTAGATAGTGCTAGAAACTACTTAAAAAATAATAGCAGAATAAAAACTGCTAGTCTAATTTCCCTAGAATTACCTGGCTCTACTGGTACTAGTACTGCTTTTATTTATTTAACTGATTATTTTAGAGATGTACTATATAATGGTATTTTGTACCAGGCCGGTAAGGTTAAGTCCATTAGCACACATAAACAAAATAGAGATTTATCTATTGGCAGTCTATCTTTTACTATTACGGGTACAGCGCAGGATGAAGTACTGAAATTAGTGCAGAATGGTGTGTCCTTTTTAGATAGAATAGTATCAATTCACCAAGCAATTATTATGGAGGATGGCTCCATTTTACCTGTAGACCCAGATACAAATGGTCCTCTACTATATTTTAGGGGGAGAATTACTGGGGGAGGTATTAAGGACAACGTTAGTACTTCTGGAGTTGGAACCTCTACAATTACTTGGAATTGTTCTAATCAGTTCTATGACTTCGATAGAGTTAATGGTAGATATACTGATGATGCTTCTCATAGAGGACTTGAAGTTGTAGCAGGACAATTAGTTCCATCTAACGGTGCTAAAAGACCTGAATATCAAGAAGACTATGGATTCTTTCATGCCAATAAAAGTATCTCTATTCTAGCAAAGTATCAGGTACAGGAAGAAAGATATAAACTAAAGTCTAAGAAAAAACTATTTGGTTTATCTAGAAGCTATAGTCTTAAAAAATACTATGAGACTGTTACTAAAGAAGTAGATATAGATTTTAACCTTGCTGCTAAGTATATACCAGTAGTTTATGGTGTACAGAAAATACCTGGAATACCTGTTTTTGCGGATACAGAACTACACAATCCTAATATAGTTTACGTAGTATATGCTTTTGCTGAGGGAGAGATAGACGGTTTTCTTGATTTTTCCTTTGGTGATAATCCTATGATTTGTATGGACTCTAATGATAGCTCTGCTAGAACCTGTTTCGGTGTTAAAAAAGTAGCCGGAGATACCATGCAGAGAATAGCATCAGGAACATCTTCTAGTAGCCCTTCCGTACATGGACAGGAGTATAAATACAACGATGGTAATGGTGATATAAGAATTTGGACTTATCATGGGAAATCTAATCAAACGGCTTCTGAAGTATTAGTAAACATAGCGAAAGAACGAGGGTTCTATCTTCAAAATATGAATGGCAATGGACCTGAATACTGGGATGCTAGGTATAAGCTATTGGATACTGCATATGCGGTAGTGCGCTTTACTATTAATGAAAATAGAACTGAGATTCCAGAAGTTAGTGCTGAAATTCAGGGTAAGAAGATAAAAATCTATCATTCTGATGGTAGAGTAACGGCTAATAGTACTAGTTTAAATGGTATCTGGCAAACGCTTGACTACTTAACTTCAGATAGGTATGGCGCAAACATTACTATTGATCAGTTCCCTCTTCAGCAATTAATACAAGAAGCTGCTATCCTAGATATTATAGATGAATCATACCAAGTATCTTGGCAGCCATACTGGAGATACGTTGGGTGGACTGACCCAGTAGCAGAAAATAGACAAATAGTACAAATGAATACTATTCTAGATACATCTGAATCAGTATTTAAAAATGTGCAAGGTTTGTTAGAGTCCTATGGCGGGGCTATTAACAACTTATCTGGCCAGTATAGAGTTACTGTAGAAAAATACTCTAATACTCCATTAGAGATTAATTTTCTAGATACTTACGGTGATTTGGAGCTATCAGATACTACTGGTAGAAATAAATTCAACTCAGTGCAGGCATCTATTGTAGATCCTGCATTAAGCTGGAAAACGAATGCCATCACATTCTATAATTCTAAATATAAAGAGCAAGATAAAAATTTAGATAAAAAATTACAATTATCTTTTGCAAATATAACTAACTACTATACTGCTAGAAGTTTTGCAGACAGAGAACTTAAGAAATCCAGATACTCAAGAACACTTTCTTTCTCATTACCATACCAGTTCATAGGGATTGAACCCAATGATGCTATCGCCTTTACTTACGATCGTTACGGATGGGATAAAAAGTACTTCCTAGTAGACGAAGTGGAAAACTCTAGAGAAGGAAAGATAAATGTTACCTTACAGGAGTATGGAGAGGATGTATTCATCAACTCTGAGCAGGTTGATAATAGCAGTAATGATATTCCTGATATTAGTAACAATGTCCTTCCTCCTAGAGACTTTAAATATACTCCTACTCCTGGCGGTTTAGTAGGCTCTATAGGTAAAAATGGTGAGTTATCCTGGTTTCCGAGTCTAACCAATAATGTAGTTTACTACTCTATTGTGCATTCCGGTCATGCTGAACCTTATATTGTGCAGCAACTAGAAACAAATCCCAATGAACGCATGATCCAAGAGGTAATTGGAGAGCCTGCAGGTTTAGCAATATTTGAAATAAGGGCAGTAGATATTAATGGTAGAAGAAGTTCTCCGGTGACTCTGTCCATAGAACTTAACTCCGCTAAAAATCTTAGTGTAGTATCTAATTTTAGGGTAACTAATACTGCTTCTGGAGATGTAACTGAGTTTGTTGGCCCAGATGTGAAACTAGCCTGGGATAGAATACCTGAAGAAGATATAATAGAGAGTATATTTTATACCCTTGAAATACACGATTCACAAAATAGGATGTTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAACGTATAATAAGGCAGATTTTGCTCTCCAGAACAGCGGTGCTCTAGGTATAAATAGAAAATTGTATTTTCGTATTAGAGCTGAAGGGGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73cdbb0dcd4b77a74d4d4a2c2a2dc4ac64ad6f069b3995bc1c743ee1d832dacc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8172
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank