Protein

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Genbank accession
WJE87875.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSTNKKFRVQNGLDVTGDVTVGGVTVINADGTVVSDVSDQLVPLQSDVAALQTSVQNIIGTSPETLDTLQEIVAAYESADADLQLLIATAVATGNTNADDIATLQPLVSSNDSDISANAALIADLLADVSALTGADTTLSESIAANTSAISDEVARALLAEQSNTDAIAALSSQVTNILSNTDSAALDSLAEIVAAFQSADSTLSGLVAQNASDISATNARTAGISTSSGSSNIQMTAEVDMDGNAVTNMANPTAAQDAATKAYVDAADANLQAQINEGSFDGSAIDQNLVPAITDTYSLGTPDMVWKDLYIGPGSLYLNGTKILEDNSGTITMYADAGQNLSFGATDGGSIDMNAGTESIQMKSDMVISVGKTISTVGGAATKFGGPVDMQGSTIDNVATPTKDGEVASKLYVDQQVGGSTLRGDKTFDSNVVVEGNLTVSGTTTTVNSETISLADNIIDLNSNLTSGAPTEHAGIRVLRGDESAVQVRWNETSDHWEVYNGSVWTKIALDTDDLTEGSTNLYFTEARARGCVSAEAGSCIDYNESTGKFSLDVAETEAAITPNSSKDADKLDGQHGSYYRINVYDANGTLVN
Physico‐chemical
properties
protein length:594 AA
molecular weight: 61205,03480 Da
isoelectric point:4,05003
aromaticity:0,04209
hydropathy:-0,10185

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJE87875.1
1 594
Domain Start End Length (AA) Confidence
N-terminal 1 331 331 0,8956
Central domain 332 530 200 0,1497
C-terminal 531 594 63 0,2716
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-331
Central
332-530
C-terminal
531-594

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage C48C1
[NCBI] 		3053735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJE87875.1 [NCBI]
Genbank nucleotide accession
OQ984149 [NCBI]
CDS location
range 3963 -> 5747
strand +
CDS
ATGAGTACAAATAAAAAGTTCAGAGTACAGAACGGGCTCGACGTTACAGGTGATGTAACAGTCGGTGGCGTTACTGTAATTAATGCTGACGGTACCGTTGTTTCCGATGTAAGTGATCAGTTGGTCCCGCTTCAGTCAGATGTTGCGGCATTACAGACTTCAGTTCAAAATATTATCGGTACGTCACCAGAAACTCTTGATACACTTCAAGAGATTGTCGCTGCCTATGAAAGCGCAGACGCAGATCTACAATTACTGATCGCAACTGCAGTTGCAACAGGCAATACTAATGCTGACGATATTGCAACACTACAGCCACTAGTATCATCGAATGATTCTGATATCTCAGCGAACGCTGCTTTAATCGCAGATTTGCTAGCAGACGTTTCTGCACTTACTGGTGCAGATACTACTTTGTCAGAGTCTATTGCTGCAAATACATCTGCAATCTCTGACGAAGTAGCTCGCGCTTTATTAGCAGAACAGTCTAATACAGATGCAATTGCTGCACTTTCGTCACAAGTTACAAACATTCTATCAAATACTGACTCTGCTGCACTTGATTCTTTGGCAGAAATTGTTGCTGCGTTCCAATCAGCAGACAGCACATTATCCGGTCTTGTTGCTCAAAACGCAAGTGACATCTCTGCAACTAACGCACGTACTGCTGGTATCAGCACATCTTCAGGTTCATCTAACATTCAGATGACTGCTGAAGTTGACATGGACGGTAACGCAGTTACTAACATGGCTAATCCAACTGCGGCGCAAGATGCAGCAACTAAGGCATATGTTGACGCGGCTGACGCTAACTTACAAGCACAGATAAATGAAGGTTCTTTCGATGGTTCTGCTATCGATCAAAACCTAGTCCCTGCTATAACTGACACGTACAGCCTTGGTACACCAGATATGGTCTGGAAAGACCTTTATATTGGTCCAGGATCTCTATACCTAAACGGCACTAAGATTCTTGAGGACAACTCTGGTACAATCACTATGTACGCAGACGCAGGTCAGAACCTATCGTTCGGTGCAACCGACGGTGGTTCAATCGACATGAATGCTGGCACCGAAAGCATACAGATGAAATCTGATATGGTTATTTCTGTCGGTAAGACTATCTCTACTGTTGGTGGCGCTGCTACTAAGTTTGGTGGTCCTGTTGATATGCAAGGTTCGACAATCGACAATGTTGCTACACCTACGAAAGACGGTGAAGTTGCGTCTAAGTTGTATGTCGATCAGCAGGTTGGTGGAAGCACCTTACGCGGTGATAAGACATTCGACTCTAATGTCGTTGTTGAAGGTAACCTAACTGTTTCAGGCACAACTACTACTGTAAACAGCGAGACTATCTCACTAGCAGATAATATCATTGACCTAAACTCAAACCTAACTTCGGGTGCTCCAACAGAGCACGCTGGTATCCGCGTTCTACGTGGAGACGAATCTGCAGTACAGGTTCGTTGGAATGAGACTTCAGATCACTGGGAAGTTTACAACGGTTCTGTATGGACTAAGATCGCACTAGATACAGACGATCTTACTGAAGGTTCAACAAACCTATACTTCACAGAAGCACGTGCACGTGGTTGTGTATCTGCAGAAGCAGGTTCTTGCATTGACTACAATGAGTCGACTGGTAAGTTCTCCCTAGACGTTGCAGAAACTGAAGCTGCTATCACACCAAACAGCTCGAAGGATGCTGATAAGCTAGACGGACAACATGGTTCGTACTATCGTATCAACGTCTACGACGCAAATGGCACTCTAGTAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
430ec1231ef4568ed562daa27df66e4a583f2b3505c6cac8eabd226e17546532
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Hecatomb: An End-to-End Research Platform for Viral Metagenomics Roach,M.J. 2022 — GenBank