Protein

View in Explore
Genbank accession
BDD79829.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MTTTVRYFAPLVWQGAGSGVVVRQAAPVVWSQQSVNAYLRNLQAIQWFKTPTPVNARKVTALQWAQDQSYVSMRRVAALQWTQDQIVVKVRNLQALTWQKQPTQGVLRQVSAFTLQQSATQGVLRQISAFTLQKTQVQQKAGGLTGLWALIQADAKQTITQAQLTVSAPVADSSKPNTNTYVTVAPAGTLLQQYSGTTKLYYARTSITNAFLNGINQTWLLPAITSATTIRALIPTINTAYGLALDPTDVVDGPVAAGATSVTLVAAPNSYVFLPGTSVYVANQTALGAAITNVNLPGFTSARGNLVDPALSLAIVNTNLPGFDDAAGHGPTTYAKTVLADAPYAYYPLNESAGTTANDLSGNARHGTYAGNMTLGSGMLLSSMGQKVANFPGDQTSWVDVTAAKNFCAGTTWSIEAWVNIASFNQKGGYSGGSGVTFLTDIGDTGSSSPVTGLEFSDPTTGLMYWPKDSLQNGPATAIAPGLNTTCHVVMTYNAGTVSMYVNSQLVATYTGATQATIRNFLRIGGTSWVGGPMNGLMGEVALYTTALTPAQIGTHYAVGSGFPNVVGQQNFMIPGTYSLVVPQDVHLVSGVGIAGGGGGWGHTANNIWGTPGAGAGLGWKNNIPVTPGETLTVVVGAPGANTYNASGVKGTAGGNTGLYRGATLLFGGNGGQPGGNTQSNSATIQGGTFSGDGGGLGGNGTLAYWQGAAGGAGAGGYMGKGGDSGGFTSQGGAGSGGGGGGGSGSAQTGSVQMTGGAGGGTGLYGMGISGGVGAVPNVQQDGFPGSFMPGSGMFGGGASNGWNASAANDPAQGGGLRLIWGAGRSYPSTLTTDQNYDPVLGGPADILAHFEGSTKSGYGFDQCGNSSAGIFNNAILTNTFSAFGTQSVSLAGGVDCIFFNPRGQTDFQVTGDFTFDVFLSKKAGATLSAAQTVMCDRNPGSAPYALPQGVGTNAMASMHFWMDTTGKLLANIFGQTNVDLGYNLWNDIPGSGTFAHVAIQVKGLVLQVYVGGVLKATYTGTTRSGATWTPQINVGNSPSLSQPLLGCYIDEVRFVNGLARYNGNFTVPTQPFHMG
Physico‐chemical
properties
protein length:1076 AA
molecular weight: 110082,67510 Da
isoelectric point:8,28349
aromaticity:0,09108
hydropathy:-0,00939

Domains

Domains [InterPro]
IPR057701
STR
147–301
IPR057701 G3DSA:2.60.120.200 IPR013320
IPR013320
STR
336–559
IPR013320 G3DSA:2.60.120.200
PF13385
LEC
395–553
PF13385 PF13385
BDD79829.1
1 1076
Architecture
STR
STR
STR
STR 147-301 | STR 332-559 | STR 843-1061 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC9
[NCBI] 		2906467 No lineage information
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79829.1 [NCBI]
Genbank nucleotide accession
LC667451 [NCBI]
CDS location
range 237053 -> 240283
strand -
CDS
ATGACGACAACCGTCCGCTATTTCGCCCCGCTCGTATGGCAGGGGGCAGGCAGTGGCGTGGTCGTACGCCAGGCAGCACCTGTAGTTTGGTCGCAGCAAAGCGTCAATGCGTATCTGCGTAACTTGCAGGCGATCCAGTGGTTTAAGACGCCTACGCCAGTGAACGCCCGTAAAGTGACGGCACTACAGTGGGCGCAGGATCAGAGTTACGTGAGCATGCGCCGGGTGGCCGCGCTGCAATGGACTCAAGACCAGATTGTGGTCAAGGTTCGTAACCTGCAAGCCCTCACCTGGCAGAAGCAACCGACCCAGGGGGTTTTGCGTCAGGTCAGTGCGTTTACGCTGCAGCAATCGGCCACGCAAGGTGTGCTTCGTCAGATCTCGGCGTTCACCTTGCAGAAGACGCAAGTGCAGCAAAAGGCCGGTGGCTTGACGGGTCTTTGGGCATTGATCCAGGCTGACGCCAAGCAGACGATCACACAGGCGCAGCTGACAGTCAGTGCGCCGGTCGCCGATAGCAGCAAACCGAACACCAACACGTATGTGACGGTCGCACCTGCTGGTACGCTTCTGCAGCAGTATTCGGGTACGACCAAGCTGTACTACGCGCGCACGAGCATCACGAATGCCTTTCTGAATGGCATTAATCAGACCTGGTTACTTCCGGCAATTACGTCGGCAACGACCATTCGTGCTCTGATCCCGACGATCAATACGGCATATGGGTTGGCACTTGATCCGACCGATGTGGTGGATGGTCCCGTGGCCGCGGGTGCAACATCGGTCACGCTGGTTGCGGCGCCGAACAGTTATGTGTTCCTGCCGGGTACCTCGGTCTACGTGGCTAATCAGACGGCGTTGGGTGCGGCGATCACAAACGTGAACCTGCCGGGCTTTACCTCCGCACGCGGCAACCTGGTTGATCCGGCACTGTCGCTCGCCATCGTGAATACCAATCTGCCGGGCTTTGATGATGCCGCCGGACATGGTCCGACGACGTACGCGAAGACTGTGTTGGCAGATGCACCGTACGCGTATTATCCGCTGAACGAATCCGCGGGCACGACAGCGAACGATCTTTCCGGAAATGCACGTCATGGTACCTATGCGGGCAACATGACACTGGGCTCCGGCATGTTGTTGTCGAGCATGGGTCAGAAGGTAGCGAACTTCCCTGGCGATCAAACATCGTGGGTGGACGTGACGGCAGCGAAGAACTTCTGTGCCGGAACGACGTGGTCGATCGAAGCGTGGGTGAATATCGCGTCATTCAATCAGAAGGGTGGCTACTCAGGTGGATCGGGTGTAACCTTCCTGACAGACATCGGTGACACGGGCTCTTCATCACCCGTTACGGGTCTGGAGTTCTCTGATCCGACCACCGGCCTGATGTATTGGCCGAAGGACAGTCTGCAGAATGGCCCAGCGACTGCGATTGCACCGGGACTGAACACGACCTGTCACGTCGTGATGACGTATAACGCAGGCACGGTCAGCATGTACGTGAATTCGCAACTGGTGGCAACCTACACCGGTGCGACGCAGGCGACGATTCGTAACTTCCTGCGCATTGGCGGAACGTCGTGGGTGGGTGGTCCGATGAATGGTCTGATGGGTGAAGTGGCGCTGTATACCACTGCACTCACACCGGCTCAGATCGGTACGCACTATGCGGTTGGGTCGGGATTCCCCAATGTCGTGGGTCAGCAGAACTTCATGATCCCTGGCACGTATAGCCTGGTGGTGCCGCAAGATGTGCATCTTGTCAGCGGCGTGGGTATTGCAGGTGGTGGTGGCGGCTGGGGTCACACCGCTAACAATATCTGGGGTACGCCAGGTGCTGGTGCAGGCTTGGGCTGGAAGAACAACATCCCAGTGACGCCAGGTGAAACACTGACAGTGGTGGTGGGTGCACCAGGTGCTAACACGTATAACGCGTCGGGTGTTAAAGGTACTGCAGGCGGTAACACTGGTCTGTACCGTGGAGCCACGTTGCTCTTTGGCGGCAATGGTGGTCAGCCGGGCGGTAACACGCAAAGCAATAGTGCGACCATCCAGGGCGGCACCTTCAGTGGAGACGGTGGCGGGCTGGGCGGTAACGGCACACTCGCTTACTGGCAGGGTGCGGCTGGTGGAGCCGGTGCCGGTGGTTATATGGGTAAGGGCGGCGACAGCGGTGGCTTTACGTCACAAGGCGGCGCAGGTTCCGGCGGTGGTGGCGGTGGTGGCAGCGGCTCGGCCCAGACCGGTAGCGTACAGATGACTGGCGGTGCAGGTGGTGGTACGGGTCTGTACGGGATGGGTATCAGCGGCGGCGTAGGTGCAGTTCCGAACGTTCAACAGGATGGCTTCCCTGGTTCATTCATGCCGGGTTCCGGGATGTTTGGTGGCGGTGCCTCGAATGGTTGGAATGCATCGGCCGCGAACGATCCGGCACAGGGTGGTGGTTTGCGTCTCATTTGGGGTGCAGGTCGTTCCTATCCGAGTACGCTTACGACCGATCAGAATTACGATCCAGTCCTGGGTGGTCCGGCTGACATTCTCGCCCACTTCGAAGGCTCGACGAAGTCCGGCTATGGTTTCGACCAATGCGGGAACTCGTCCGCGGGTATCTTCAACAACGCCATCCTCACGAATACGTTCTCGGCATTTGGAACGCAATCGGTGTCGCTGGCTGGTGGAGTGGACTGCATCTTCTTCAACCCGCGCGGTCAGACTGACTTCCAGGTCACAGGGGACTTCACGTTCGATGTCTTCCTGAGCAAGAAAGCAGGTGCGACGCTGTCTGCTGCACAGACGGTGATGTGTGATCGTAATCCGGGCTCAGCACCGTACGCTTTGCCACAAGGCGTAGGTACGAATGCCATGGCGTCCATGCACTTCTGGATGGATACCACCGGCAAACTGTTGGCGAACATCTTTGGCCAAACCAACGTGGATCTGGGCTACAACCTCTGGAATGATATTCCGGGAAGTGGCACCTTTGCTCACGTGGCGATTCAGGTCAAGGGTCTCGTGCTGCAAGTCTACGTAGGTGGCGTGCTGAAGGCAACCTATACGGGTACAACCCGTAGCGGGGCCACCTGGACACCGCAAATCAACGTGGGTAACAGTCCGTCGCTGAGTCAGCCATTGCTTGGTTGTTACATCGACGAAGTGCGTTTCGTCAACGGCCTGGCACGCTACAACGGCAACTTTACTGTACCGACTCAGCCCTTCCACATGGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b53ab1459d098599edb63cfbc01fe9099fba42fefb1e457c93de5b0fc1dd5a3e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2833
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank