Protein

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Genbank accession
XKC19400.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPRVVDPRPRRVADKDPLQGLLNFEEIDLTAEKAGERIVGALDHVRDTLLQWIKDTTGIDLSGAVAFVDWMVEQIREQIGVNLATLQELLENLEVPSLGELLAALNGTYTGDDAILTGIAGWSRNVRARLGGLIDASRIPQLSLAQLTSRPGPNLLSGFGDFADGDTLDGDDVWVWDGAVGHDAPGSARTTADGTTKILTSEAVAVADGQQLECTGWVRWAAASGSGPCMQLLIVPFVGDVAQTAVVVANIVAPPGTSGASSESTLGGSYVVPAGVTSVRVRLTVEAAMTAGTVWFDDIGLRKTATSLPQQWVSGLVDGLGDLWDGVENVATIITQIADIFAGAVVTPINAAVAQVKDWFLGLLGWQDDAATATDAIAESVVSVRTQVTYVRSVISVRSGRPLHETGPDRTACVSVPFHTLNLSPGGMSVGGGAHNVTISGNTGYANGPDNHRHSGSQLDASAPNHVHTLTMNTPVVNATASYAPWASVIIDAAAERKVLGWAAYKSGSVTGFYLDVFRQEPDGSVGPVIYSSPNLAGELLTEIAWMQHLMDGASVVADIDDVSDIQFRMTGTGIVHIAGPNFPYVKPITGMRPYSCGSGRNPSTTPVPASLSTAERDAMYVGPVPFVSLGIDVGQASIPVVIADDLNRASFGAEYKVFGNIKIEGGRAKHAATGIVSNSGAAMRVESLNSDDFEIGFDFWPGGQIAGVGGRCTTSLGAGVWLVGDNDGLYIQTGAYNGRTTRQTLASAGAGRYTLRPRRSADDTHYIYEVFYGNPDATDPIGSWADTGGIVTGGIGRRRVAMVAHGAAFFPSSELDNFVARDIAAVGA
Physico‐chemical
properties
protein length:829 AA
molecular weight: 86811,32760 Da
isoelectric point:4,73886
aromaticity:0,07117
hydropathy:0,05090

Domains

Domains [InterPro]
DC_2145
ATT
1–150
DC_2145 G3DSA:2.60.120.260
DC_0513
STR
255–829
DC_0513
XKC19400.1
1 829
Architecture
ATT
STR
ATT 1-150 | STR 157-829
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC19400.1
1 829
Domain Start End Length (AA) Confidence
N-terminal 1 438 438 0,6245
Central domain 439 637 200 0,1309
C-terminal 638 829 191 0,9230
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-438
Central
439-637
C-terminal
638-829

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Pimento
[NCBI] 		3367560 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC19400.1 [NCBI]
Genbank nucleotide accession
PQ244022 [NCBI]
CDS location
range 20304 -> 22793
strand +
CDS
ATGCCGCGCGTAGTAGATCCGCGGCCGCGCAGGGTCGCGGACAAAGATCCGCTGCAGGGACTACTCAACTTCGAAGAGATCGACCTCACCGCCGAAAAGGCCGGCGAACGTATCGTCGGCGCGCTCGACCACGTGCGCGACACCCTGTTGCAGTGGATCAAGGACACCACCGGGATCGACCTGTCCGGGGCGGTGGCGTTCGTCGACTGGATGGTCGAGCAGATCCGCGAACAGATCGGCGTCAACCTGGCGACGCTGCAGGAACTGCTCGAAAACCTCGAGGTTCCGAGCCTTGGCGAACTACTCGCCGCGCTGAACGGCACCTACACCGGCGACGACGCGATCCTGACCGGTATCGCCGGGTGGTCACGGAACGTGCGGGCACGCCTGGGCGGGCTCATCGACGCGTCGCGTATCCCGCAACTGTCGTTGGCGCAGTTGACTTCGCGGCCGGGGCCGAACCTGTTGTCGGGGTTCGGTGACTTCGCCGACGGCGACACCCTCGACGGCGACGACGTGTGGGTGTGGGATGGGGCAGTAGGGCACGACGCGCCGGGATCGGCACGCACGACCGCCGACGGGACGACGAAGATTCTCACGTCTGAGGCGGTCGCGGTCGCCGACGGGCAGCAACTCGAGTGCACGGGCTGGGTTCGCTGGGCGGCTGCGTCCGGGTCCGGGCCGTGCATGCAACTGCTGATCGTGCCATTCGTCGGCGACGTCGCGCAGACGGCGGTCGTGGTGGCGAACATCGTTGCGCCGCCGGGAACGTCGGGCGCCTCGAGTGAGAGCACGCTCGGCGGTTCCTACGTTGTGCCGGCCGGCGTGACGTCGGTGCGGGTGCGTCTGACCGTGGAAGCAGCGATGACCGCCGGCACGGTGTGGTTCGACGACATCGGGTTGCGTAAGACGGCGACCAGCCTGCCGCAACAGTGGGTGTCGGGACTCGTCGATGGTCTTGGCGACCTGTGGGACGGCGTCGAGAACGTCGCGACGATCATCACTCAGATCGCCGACATCTTCGCCGGTGCCGTGGTGACCCCGATCAACGCCGCGGTGGCTCAGGTTAAGGACTGGTTCCTCGGCCTGCTCGGATGGCAGGACGACGCAGCAACGGCGACTGACGCAATCGCCGAATCGGTTGTCTCAGTGAGAACTCAGGTTACCTACGTCCGGTCGGTGATCTCGGTTCGCAGCGGTCGACCCCTGCACGAGACCGGCCCGGATCGCACGGCATGCGTGTCAGTGCCGTTCCACACGCTCAACTTGAGTCCGGGCGGGATGTCGGTCGGCGGCGGTGCGCACAACGTAACGATCTCCGGCAACACCGGATACGCAAACGGTCCGGACAACCACCGGCACAGCGGGTCGCAACTGGACGCCTCGGCGCCGAATCACGTGCACACCCTCACGATGAACACGCCGGTCGTCAACGCGACCGCGAGCTACGCACCGTGGGCGTCGGTCATCATCGACGCTGCGGCCGAGCGCAAGGTGTTGGGTTGGGCGGCCTACAAATCGGGCAGTGTCACCGGGTTCTATCTCGACGTGTTCCGGCAGGAGCCTGACGGTTCAGTCGGTCCGGTCATCTACTCGTCGCCGAACCTGGCAGGCGAGTTGTTGACCGAGATCGCGTGGATGCAGCACCTCATGGATGGGGCGTCAGTGGTCGCCGACATCGACGACGTCTCCGACATCCAGTTCCGGATGACCGGCACGGGGATCGTGCACATTGCTGGCCCAAATTTCCCGTACGTCAAACCGATTACGGGAATGCGCCCGTACTCGTGCGGGTCGGGCCGCAATCCGTCGACCACGCCAGTTCCGGCGAGCCTGTCGACTGCGGAGCGCGATGCGATGTACGTCGGTCCTGTTCCGTTCGTCTCGCTCGGTATCGACGTCGGTCAGGCCAGCATCCCGGTCGTGATCGCCGACGATCTCAACCGCGCGAGCTTCGGCGCCGAGTACAAGGTATTCGGGAACATCAAGATCGAGGGTGGTCGAGCCAAGCACGCAGCCACCGGAATCGTCAGCAACAGCGGCGCCGCGATGCGCGTCGAGTCCCTGAACTCCGACGACTTCGAGATCGGGTTCGACTTCTGGCCGGGCGGTCAGATCGCAGGAGTCGGAGGTCGCTGCACGACGAGCCTCGGTGCCGGTGTGTGGCTCGTCGGTGACAATGACGGCCTCTACATCCAGACGGGCGCCTACAACGGCCGGACCACCCGCCAGACGCTTGCGTCCGCCGGGGCTGGCCGGTACACGCTGCGGCCCAGGCGATCCGCCGATGACACCCATTACATCTACGAGGTGTTCTACGGCAATCCGGACGCCACGGACCCGATCGGCTCATGGGCCGACACGGGCGGGATCGTGACCGGCGGGATCGGCCGTCGACGGGTCGCGATGGTCGCCCATGGCGCCGCGTTCTTCCCGTCGAGCGAGCTCGACAACTTCGTCGCCCGCGACATCGCAGCGGTGGGCGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e89a8f4b41935a668a2f5992f530364f61a46be515e993be50b427a1f4bdb51a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3376
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50