Protein

View in Explore

Genbank accession

APU02273.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,71

Evidence RBPdetect2

Probability 0,94

Protein sequence

MADLKVGTTIGGSPAWNQGNLPLVPSGDRILYKGARVYSESDKPSADELSVLSINGGRLKGQLQIDSASDNIFDLNSTDSGAVFMRYMHNNSNKAYTGIDASGNFYVRMADGASRAGIAFQIDNVSQDITFGANLKGPAGRAFSINKGDQPFIRDHGNGNVTISALSKVDGNPGDLYLGYNSAGMVTNTVRLESPLFWKGARQLVDSNGFILRAAMDNNYYNQSEADARFIRLNNNTTTDGFILSKTAEYTDAGRNMGYSGFYRHNGVDGFSGLTMHVAHPSYSNGAYSRGITFAYGSSSYGLYTYGYDSAGVRLANQKIYTEADKPTPQELGALAAEANAVSASKLQTPRRISLSSGASGSVLFDGSGDVVIPVTIANDSHTHNIYVKKSGDIMSGNLVVNAAVDANELRAGDATTKARIALSSDTVFFQGGPIGTTGLHKIAMSGYMGKGIDALTYWMTNGVTPVVRWGSVDNKMFHEGYRPFDVQSTSLASKSCNDALESGFYSIFGTTADTPYGTGPSGSTMVVSRWSGTGVSQTFYTYNSDRVFVRRLVGTTWNAWFELYSTSKIPTPAEVGALAVNANAVSATRLQTARLISGVPFDGTSNITITATNVGALPITGGDINGNLLVKGTLTNEGQLISYDSSTRGYGFRSTYSTGWLYTQTGKVDRDVNDQKHNLSGWYGTPLSALRFTMAEGTSPHVLWGSTSHDVLHIGKSYGVGIRQGNGASNGHIYTEDGSRDFNKLITAGRYSVDGQWLNGRAGAAAATYVGTAEVEVRAWGSGPAYIQTFTQLEGGLPSRYNRVGTGTYPNIVWASWESGTKEWEYQAGYRMMISRSGEGVYPYMTIHKADLPPTGAESVIGAWQSKIGVPPTANNPDSAQLATIVASVVDTTNRYATLRLSARDITTNGILSIVDIGKDGLVVTNGGKKVELTAGVARAEKFIASDPYAFVSSASNTHGVYLGNSASDKRLILGGGNNTAGAVHVRPQGISTETGETVFNTNGTISNGTTPSAPGHLTNKVYVDNLIAQQVSKTGDTMSGQLVIQTADQAPLMLRSTTVGVVTPQYIVGNDSTGAQRWYVGQAWGAGSPDVVLHSTANSTYLRLEANQISFNKNPISIAAQGTAAGSLVRRDFLESSLSIQTPNNAIKIPVANLNDYQTPGYYYQDSNANAVSGSNYPTQQAGALVVTKAAGIIQEYTVYGSGVRFIRAFYTNVWSAWATIYDSLRPPTAAAVGALPVAGGTLTGGYLQIRGSANPMLELHQPGQVAAVIYLTSAGQLRFGTGNGAGGETAVRMTVDANGAVATIGSINGGAGVYDVGQRVYSPNNPQPSLTPTQIGNALASMAYDAVGQYAMLLVAVDVGTWLVPGTVLPGSQLRYSTAEGKDPSNSPPGNWRLHGRTSQGGQWGAWNVSLWQRVS

Physico‐chemical properties

protein length:	1419 AA
molecular weight:	150230,17410 Da
isoelectric point:	7,70154
aromaticity:	0,09161
hydropathy:	-0,22424

Domains

Domains [InterPro]

DC_1903
ATT
1–482

DC_1903 cd19958 DC_1389 cd19958 DC_1233

DC_1592
STR
435–868

DC_1592 G3DSA:6.20.80.10

IPR048388
ATT
1065–1123

IPR048388

DC_1909
STR
1069–1323

DC_1909

APU02273.1

1 1419

Architecture

ATT

STR

ATT

STR

RBD

ATT 1-482 | STR 483-868 | STR 879-1064 | ATT 1065-1123 | STR 1124-1323 | RBD 1333-1419

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1903	ATT	DC_1903	1	482	Novel HMM	DC_1903	N-terminal	Low	Positional only	49 proteins / 49 hits
DC_1592	STR	DC_1592	435	868	Novel HMM	DC_1592	Central	Low	Positional only	38 proteins / 38 hits
cd19958	STR	DC_0464	498	565	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_1389	STR	DC_1389	879	1116	Novel HMM	DC_1389	Central	Low	Positional only	19 proteins / 19 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	1054	1115	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	1065	1123	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
DC_1909	STR	DC_1909	1069	1323	Novel HMM	DC_1909	Central	Low	Positional only	63 proteins / 63 hits
cd19958	STR	DC_0464	1153	1224	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_1233	RBD	DC_1233	1333	1419	Novel HMM	DC_1233	C-terminal	Low	Positional only	22 proteins / 22 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

APU02273.1

1 1419

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	404	404	0,1438
Central domain	405	607	204	0,3665
C-terminal	608	1419	811	0,7409

Note: Constraints were applied during segmentation.
Fixed 96 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-404

Central
405-607

C-terminal
608-1419

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Aeromonas phage Riv-10 [NCBI]	1932906	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

APU02273.1 [NCBI]

Genbank nucleotide accession

KY290957.1 [NCBI]

CDS location

range 151490 -> 155749
strand +

CDS

ATGGCAGATCTGAAAGTTGGAACTACGATAGGTGGTTCTCCTGCTTGGAACCAAGGTAATTTGCCATTAGTTCCAAGCGGTGATAGAATATTATACAAAGGAGCGCGTGTTTACAGTGAATCTGATAAACCGTCTGCCGATGAACTGAGTGTTCTGTCAATAAATGGTGGTCGTTTGAAGGGTCAATTACAGATTGATTCAGCATCCGATAACATTTTCGATTTGAACTCAACCGATTCTGGCGCAGTTTTCATGCGCTATATGCATAACAATAGCAACAAAGCCTACACTGGCATCGACGCGAGCGGGAACTTTTACGTCCGCATGGCTGACGGCGCATCTCGCGCTGGCATTGCTTTCCAAATTGACAACGTTTCGCAAGACATAACCTTCGGGGCGAACCTGAAAGGTCCTGCCGGCCGTGCATTCTCAATCAACAAAGGCGATCAACCGTTCATCCGTGACCACGGCAACGGAAACGTTACAATTTCAGCTTTGTCAAAAGTAGATGGAAACCCTGGTGATCTGTACCTCGGATACAATTCCGCTGGTATGGTGACCAATACAGTTCGACTGGAAAGTCCGCTGTTTTGGAAAGGAGCGCGCCAGCTGGTTGACTCTAATGGTTTCATCCTTCGTGCAGCGATGGATAACAACTATTACAACCAATCTGAAGCTGATGCGCGTTTTATCCGTCTGAACAATAACACCACGACCGACGGTTTCATCCTGTCGAAAACCGCTGAATATACTGACGCTGGTCGAAACATGGGTTATTCTGGATTCTATCGCCATAATGGTGTTGACGGATTCTCCGGTTTAACGATGCATGTGGCGCATCCTAGCTATAGCAATGGAGCATACTCCCGTGGTATCACCTTTGCTTATGGTTCTTCGTCTTATGGTCTTTACACCTATGGTTATGACAGTGCTGGTGTTCGTCTGGCGAATCAGAAAATCTATACCGAAGCCGATAAGCCGACTCCGCAAGAGTTAGGTGCGCTCGCCGCCGAGGCCAACGCAGTATCAGCTTCCAAACTTCAGACCCCTCGTCGTATTTCGCTTTCAAGCGGTGCTTCTGGTTCTGTATTGTTTGACGGCTCTGGTGATGTTGTTATTCCGGTAACAATCGCAAACGACAGTCACACGCACAACATTTACGTTAAGAAATCTGGCGACATAATGTCAGGTAACTTGGTTGTTAATGCTGCAGTTGACGCGAATGAATTGCGGGCTGGCGATGCGACAACTAAAGCTAGAATTGCTCTGAGTTCGGACACCGTATTCTTCCAAGGTGGTCCTATCGGAACTACCGGTTTGCATAAAATCGCGATGTCTGGTTATATGGGCAAAGGCATTGACGCACTGACCTATTGGATGACCAATGGCGTTACTCCGGTAGTTCGTTGGGGTTCAGTTGACAACAAGATGTTTCACGAAGGATACCGTCCTTTTGACGTCCAGTCAACTTCATTGGCTTCAAAAAGCTGTAATGACGCTTTAGAATCAGGTTTCTACTCTATTTTCGGAACAACTGCCGATACTCCATATGGCACTGGACCTTCTGGTTCAACTATGGTTGTTTCACGCTGGTCTGGCACTGGAGTTTCGCAGACATTTTACACCTACAACTCCGACCGCGTATTCGTACGTCGCTTAGTTGGGACAACTTGGAATGCTTGGTTTGAATTGTATTCAACCTCGAAAATTCCAACCCCTGCTGAAGTTGGGGCGTTGGCTGTAAACGCGAACGCTGTCTCAGCTACCCGTTTGCAAACAGCTCGTTTGATTTCCGGTGTTCCGTTTGATGGTACTTCAAACATCACAATTACTGCTACAAACGTTGGTGCTCTCCCAATAACCGGCGGTGATATTAACGGTAACCTTTTGGTTAAAGGAACTTTGACGAACGAAGGTCAACTAATTTCATACGACAGTTCGACCCGCGGTTATGGTTTCCGGTCAACGTATTCTACTGGATGGTTATACACCCAAACAGGTAAAGTTGATCGCGACGTAAACGATCAAAAGCATAATTTGTCGGGCTGGTATGGAACTCCGTTGTCGGCACTGAGATTCACCATGGCTGAAGGAACTTCTCCTCACGTCCTTTGGGGTTCAACGTCTCACGATGTTTTGCACATTGGTAAATCATATGGCGTCGGAATTCGTCAAGGTAATGGTGCCAGCAATGGACACATTTATACTGAAGATGGAAGTCGCGATTTCAACAAATTGATTACCGCTGGTCGTTATTCAGTTGATGGGCAATGGTTAAATGGCCGAGCTGGCGCAGCAGCTGCGACATATGTTGGAACCGCTGAAGTTGAAGTTCGTGCATGGGGCTCAGGTCCTGCCTATATTCAGACGTTCACTCAACTTGAAGGTGGTTTGCCGTCACGTTACAACCGAGTCGGTACCGGAACATATCCGAATATCGTTTGGGCATCATGGGAATCAGGCACAAAGGAATGGGAATATCAAGCTGGTTATCGCATGATGATTTCTCGTTCCGGGGAAGGCGTATATCCGTATATGACCATTCACAAGGCTGATTTGCCTCCGACCGGCGCAGAGTCTGTTATAGGCGCCTGGCAGTCTAAAATCGGGGTTCCGCCTACAGCTAATAACCCGGATTCAGCACAATTAGCAACAATAGTTGCATCTGTCGTGGATACAACCAATCGTTATGCTACTTTAAGATTGTCTGCACGCGATATCACAACAAACGGAATACTGTCTATTGTTGATATTGGTAAAGATGGTTTAGTCGTGACCAATGGTGGTAAAAAGGTTGAATTAACTGCAGGCGTTGCACGCGCTGAAAAGTTTATTGCAAGCGACCCTTATGCATTCGTTTCAAGTGCTAGCAACACCCATGGTGTTTATCTTGGCAATAGTGCTTCGGACAAGAGACTGATACTCGGTGGCGGTAACAACACCGCTGGCGCAGTTCATGTTCGTCCACAAGGTATTAGTACCGAAACAGGCGAAACAGTATTCAACACCAACGGTACCATTAGTAATGGTACTACCCCGAGCGCGCCCGGTCATTTGACCAACAAGGTTTATGTTGATAACCTAATTGCTCAGCAAGTGAGTAAAACCGGCGATACAATGAGTGGTCAACTCGTGATACAAACCGCCGATCAAGCGCCATTGATGTTGCGGAGCACTACAGTTGGTGTTGTCACGCCTCAATATATCGTAGGTAACGATTCTACTGGTGCGCAACGATGGTATGTGGGTCAAGCATGGGGCGCGGGTTCTCCAGATGTAGTTCTGCATAGCACTGCAAACTCGACTTACCTTCGTCTTGAAGCAAACCAAATATCTTTTAACAAAAACCCAATATCAATTGCCGCGCAAGGTACGGCTGCGGGTTCTCTGGTTCGCCGAGATTTTCTTGAGAGTTCATTGTCGATTCAAACGCCGAATAATGCTATCAAAATTCCTGTTGCCAACTTAAATGACTATCAAACACCCGGATATTACTATCAGGATTCCAACGCAAACGCGGTTTCCGGAAGTAACTATCCAACGCAGCAAGCTGGAGCTTTGGTTGTTACAAAAGCAGCTGGAATAATTCAAGAATATACTGTTTACGGCAGCGGTGTTCGTTTTATTCGAGCTTTTTATACCAACGTTTGGTCAGCATGGGCAACCATATATGATTCGCTTCGCCCACCTACAGCAGCAGCTGTAGGTGCGTTGCCGGTAGCCGGTGGTACTTTGACTGGTGGTTACCTGCAAATACGCGGAAGCGCAAACCCAATGTTAGAATTACACCAACCTGGCCAGGTTGCCGCTGTAATTTACTTGACATCTGCAGGGCAATTAAGATTTGGCACTGGGAATGGGGCTGGCGGTGAAACTGCTGTTCGTATGACGGTTGACGCGAACGGCGCTGTTGCTACTATAGGATCTATCAATGGCGGCGCTGGTGTTTATGATGTCGGGCAACGTGTTTATTCTCCGAATAACCCGCAACCAAGTCTGACACCAACCCAAATCGGTAACGCTTTGGCAAGTATGGCTTATGACGCTGTTGGTCAATACGCAATGCTCTTGGTGGCTGTTGACGTAGGAACTTGGCTTGTTCCTGGAACCGTTTTGCCGGGTTCACAACTTAGATATTCTACAGCTGAAGGTAAAGATCCATCCAATTCTCCTCCAGGAAACTGGCGTTTGCACGGTCGTACAAGCCAAGGCGGACAATGGGGTGCTTGGAACGTTTCGCTTTGGCAGCGTGTTAGCTAA

Genome Context

Tertiary structure

PDB ID

98645cccb18515417ec556ca60e81704af0240bb981921d52e9bffe5a85368f0

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,5298

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence