Protein

View in Explore
Genbank accession
QJB22077.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQNISGFGLSATVIASATFPTGFQVNAFADDASPIDTPDFELADTAMGLNGHGLNWSRPQMSEFTFNVIAGSDDDKNFEILFEANRIGLGKRSARDKIAATVNYPDGSIESFSEGVMVTGTIMPKISAAGRFETRAWRFRFQNKTKVEG
Physico‐chemical
properties
protein length:149 AA
molecular weight: 16181,89750 Da
isoelectric point:4,94735
aromaticity:0,10738
hydropathy:-0,23356

Domains

Domains [InterPro]
IPR054440
STR
2–144
IPR054440
QJB22077.1
1 149
Architecture
STR
STR 2-144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage FoX6
[NCBI] 		2723902 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJB22077.1 [NCBI]
Genbank nucleotide accession
MT161386.1 [NCBI]
CDS location
range 14835 -> 15284
strand +
CDS
ATGCAAAACATTTCTGGATTCGGCCTTTCCGCTACCGTCATCGCGTCCGCAACATTCCCGACCGGTTTTCAGGTAAACGCATTCGCTGACGACGCAAGTCCAATTGATACTCCTGATTTTGAGCTCGCAGATACTGCAATGGGCTTGAATGGCCACGGCCTTAACTGGTCTCGCCCTCAGATGAGCGAATTCACTTTCAATGTCATTGCGGGCAGTGATGATGACAAGAATTTCGAAATTCTTTTCGAGGCGAACCGAATTGGCCTTGGAAAGCGCTCTGCACGCGATAAGATCGCCGCCACAGTAAACTACCCTGACGGCAGCATCGAATCCTTTTCAGAAGGCGTCATGGTCACCGGCACGATCATGCCCAAGATCAGCGCGGCAGGTCGGTTTGAAACCCGTGCTTGGCGCTTTCGCTTCCAGAACAAGACGAAGGTTGAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e4979f17b32acad87a6033e44eaf44f67537664258de559fe2bdf7d12554c8f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of an integrated pest management strategy to control Xanthomonas campestris pv. campestris by using bacteriophages Fortuna,K.J., Holtappels,D., Lavigne,R. and Wagemans,J. 2022-01-27 — GenBank