Protein

View in Explore
Genbank accession
XQO94391.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSEVYVKSFGAVGDGVTDDTEALQAAIDATPVNGTLLLEAGATYKTSKDLVGVKNIHFLGKGATIVATHHKGRGLVFEGSLKATTTTSAAYTANTTYVTVGSTSGMAVGDQIRIYHTGDLYDTSRAYYYKGGNFLITKISGNNVYISRRIPYDMKSGAKVEVYKPITVTVDDLTIKHTGTLGSSVYGEYGLNIRFSKYSEVSNVTVDNFNHNIKMDMTLNCLLYRVKTGKAYWAGSSESYGVSNYSGNGLMIMHSTLNSGRHGYTTTGQETSYDTVLNRCTIGQDDAVDLAGLDCHGNNYSLRALECTIKRFHLAGNCLLERCTVNESAKGNSSSFMVAETRPRSNFFLKDCYLYSPVYKIDAWGQQPTTSRKYIGSIVFENVKGGDAYTQCTFKSRDTGGSVQAIIDKLIVRGCENFTLVTNEQINNMYFEEVNTKRDAKILEQVGDAKADKIEFKKCTLPARWRTFYLTNFKNLKLIDCKWNVINSSAASMWVTSSAASVDLIRTDFTFGGGVETGGLDKFTTTQTSSIKFKQPSSIKTKRRVTYTNI
Physico‐chemical
properties
protein length:550 AA
molecular weight: 60515,60960 Da
isoelectric point:8,90349
aromaticity:0,10182
hydropathy:-0,29291

Domains

Domains [InterPro]
DC_2190
STR
1–440
DC_2190 DC_0865
IPR012334
STR
2–510
IPR012334
IPR011050
STR
3–429
IPR011050
IPR024535
ENZ
6–216
IPR024535
XQO94391.1
1 550
Architecture
STR
RBD
STR 1-510 | RBD 511-550
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQO94391.1
1 550
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,8451
Central domain 16 524 510 0,9909
C-terminal 525 550 25 0,7024
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-524
C-terminal
525-550

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BliM_Yucatan
[NCBI] 		3411688 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus licheniformis
[NCBI] 		1402 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQO94391.1 [NCBI]
Genbank nucleotide accession
PV261948.1 [NCBI]
CDS location
range 77884 -> 79536
strand -
CDS
ATGAGCGAAGTATATGTAAAATCTTTTGGAGCAGTAGGGGATGGAGTTACAGACGATACAGAAGCATTACAAGCAGCAATTGACGCTACACCTGTAAATGGGACTCTTTTACTTGAAGCCGGAGCAACTTATAAAACAAGCAAAGACCTAGTCGGAGTTAAAAACATTCATTTTCTAGGTAAAGGCGCAACAATTGTCGCTACTCATCACAAAGGAAGAGGTTTAGTCTTTGAAGGCTCCTTAAAGGCTACAACAACCACTTCCGCAGCGTATACAGCCAACACTACATACGTAACGGTTGGGAGTACATCAGGAATGGCTGTAGGAGATCAGATCAGAATTTACCACACTGGAGACTTATATGATACATCTAGAGCTTACTATTATAAAGGTGGTAACTTCCTTATTACAAAAATCTCAGGAAACAATGTCTATATCAGCAGACGTATTCCTTATGACATGAAGTCCGGAGCAAAAGTCGAAGTATATAAACCGATTACAGTTACGGTAGATGACCTCACAATCAAGCATACCGGTACCCTTGGAAGCTCTGTATACGGAGAGTACGGCTTAAACATCCGATTCTCTAAATACTCTGAAGTAAGTAATGTTACAGTAGACAACTTTAACCACAACATTAAAATGGATATGACGTTGAACTGCCTGTTGTATCGAGTTAAAACAGGTAAAGCATACTGGGCAGGCTCTTCTGAAAGCTACGGTGTGTCTAACTACTCTGGTAACGGTTTGATGATCATGCACTCTACCTTGAATAGTGGTAGACACGGATATACAACAACTGGACAAGAGACTTCATACGATACAGTCCTAAACAGATGTACGATCGGACAGGATGACGCGGTAGATTTAGCCGGACTAGACTGTCATGGTAACAACTACTCTTTACGGGCGCTAGAGTGTACAATTAAACGATTCCACTTGGCAGGAAATTGCTTGTTAGAGAGATGTACAGTTAACGAGAGTGCTAAAGGTAACAGCAGTAGCTTCATGGTAGCAGAAACACGACCTAGATCAAACTTCTTTTTGAAGGATTGCTATTTGTACAGCCCTGTATATAAAATTGATGCTTGGGGACAACAACCGACAACATCACGTAAGTACATCGGTAGTATCGTATTTGAAAATGTGAAAGGTGGAGACGCCTATACACAATGTACGTTTAAGTCTCGTGACACAGGTGGCTCTGTTCAGGCAATTATCGACAAACTAATTGTGCGTGGCTGTGAGAACTTTACACTTGTTACAAATGAACAGATTAACAATATGTATTTTGAAGAAGTGAATACAAAACGAGATGCTAAAATTCTTGAACAAGTTGGAGATGCTAAAGCAGATAAAATTGAGTTCAAAAAATGCACACTGCCTGCACGTTGGAGAACTTTCTATCTAACTAATTTCAAGAACTTAAAGCTAATCGACTGTAAATGGAATGTAATTAATTCTTCCGCAGCGTCTATGTGGGTTACAAGTTCTGCTGCTTCAGTAGACTTGATCCGTACAGACTTTACATTTGGCGGAGGAGTAGAGACTGGTGGTCTTGATAAGTTTACAACAACTCAGACATCATCTATCAAATTTAAGCAGCCATCCTCTATTAAAACGAAACGAAGAGTAACGTATACTAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
798a89cc86110fbfbc1b727a88d561f1a0b3c5523c15f940e0a716218bdf182a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of the bacteriophage Yucatan specific to Bacillus licheniformis Bravo-Perez,D., Gonzalez-Gomez,J.P., Castro-Longoria,E., Chaidez-Quiroz,C., Perez-Brito,D.C., Hernandez-Zepeda,C., Minero-Garcia,Y. and Moreno-Valenzuela,O.A. 2019 — GenBank