Protein

View in Explore
Genbank accession
XJP08787.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSTRVSASRLRVPTPVLDTDAANKAYADSKLTKLAVGQNTQIYARNGAGVDTGIGYSGNPLANTIPIRDAGGRIAVEDPTAIGHAATKNYVDTTTPKIADGAVISGPNNLSGALGTWAPESSGFIHLPHLFNDLAYNIIRGGAITITQNGNPIASANIPKVFEPNTTALSIALVDKATDVFVVEVDTCVAFRYGTQVGIAMPSGFRGKNVVIEGWYNDVWNPITTRSSVETGLVIQAISVPTSATTPMTRLRYTIRDFHSSASFRISSIFAMAYNSPLLEQGFVSRAGGDLYGPLYTPADPTRADELVRKAYADTKVNQTALGNRVYGTNSSGTDAPVQFSSAPTPATLVYRSTDGVTSVGEPVADTHATTKLYVDTQLLGKVNNNDSRLSDARTPTAHSHAWSEVTGKPTVFPPEIGSTATTAVAGNDARLTNARTPTAHTHTVSELSDASTVAKTALVAADAATFRSAIGAGTGNSNLAIGTTSTTAKAGDYQPTWAQVTGKPTTFAPIIGSGAADAVAGNDARLTNARTPTAHTHLWADITDKPTTFAPIIGSTATTAVAGNDARLTDARVPLDNSVTNVKIPVGAAIDPTKLGTGRVIAVDGADAPISIITKYLSQAQYDALGTKDPNTEYNII
Physico‐chemical
properties
protein length:638 AA
molecular weight: 66445,30460 Da
isoelectric point:6,42289
aromaticity:0,06270
hydropathy:-0,13009

Domains

Domains [InterPro]
DC_0646
STR
1–633
DC_0646
IPR056923
RBD
617–638
IPR056923
XJP08787.1
1 638
Architecture
STR
STR 1-638
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XJP08787.1
1 638
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,9666
Central domain 93 312 221 0,5819
C-terminal 313 638 325 0,2328
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-312
C-terminal
313-638

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage UBSmoodge
[NCBI] 		3162901 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP08787.1 [NCBI]
Genbank nucleotide accession
PQ201087 [NCBI]
CDS location
range 19255 -> 21171
strand +
CDS
GTGAGCACGCGGGTATCTGCATCACGTCTGCGCGTCCCAACGCCTGTCCTCGACACTGACGCGGCTAACAAGGCGTACGCAGATAGCAAACTCACCAAACTCGCCGTCGGGCAGAACACGCAGATTTACGCACGTAACGGAGCGGGCGTCGACACCGGCATCGGGTACTCGGGCAACCCCCTCGCGAACACCATTCCGATCCGAGATGCCGGAGGGCGGATCGCGGTTGAAGACCCGACTGCCATTGGTCATGCCGCCACGAAGAACTACGTGGACACGACCACTCCGAAGATCGCAGACGGTGCAGTCATCTCGGGGCCGAACAACCTGTCCGGCGCACTCGGTACGTGGGCACCAGAGTCCTCGGGGTTCATACACCTGCCGCATCTGTTCAACGACCTCGCCTACAACATCATCCGTGGCGGTGCGATCACCATTACGCAGAACGGCAACCCGATTGCCTCTGCGAACATCCCGAAGGTCTTCGAGCCGAACACCACAGCACTCAGCATTGCATTGGTGGATAAGGCAACAGACGTGTTCGTGGTTGAGGTCGACACATGCGTCGCCTTCCGCTACGGCACGCAGGTCGGCATCGCCATGCCCTCGGGGTTCCGTGGCAAGAACGTGGTGATCGAGGGCTGGTACAACGACGTATGGAACCCAATCACCACGCGCTCATCTGTCGAGACGGGTTTGGTGATTCAGGCAATCAGCGTCCCGACCAGTGCCACCACTCCCATGACGCGGTTGCGGTACACGATCCGGGACTTCCACTCATCGGCCAGCTTCCGCATTTCCAGCATCTTCGCGATGGCGTACAACTCGCCGTTGCTCGAACAGGGCTTTGTGTCGCGTGCCGGTGGCGATCTCTACGGGCCGCTCTACACACCCGCTGATCCGACGCGGGCAGACGAACTCGTGCGTAAGGCGTACGCAGACACGAAGGTCAACCAGACTGCACTGGGAAACCGTGTCTATGGCACCAACTCAAGTGGCACCGACGCACCTGTGCAGTTCTCTTCTGCCCCAACCCCGGCGACACTCGTCTACCGATCGACCGATGGAGTTACGTCAGTTGGCGAACCTGTTGCTGACACGCACGCAACCACCAAGCTCTATGTGGACACTCAGCTACTGGGCAAGGTCAACAACAATGACTCGCGGTTGTCCGATGCGCGTACGCCGACAGCACACAGTCACGCGTGGTCGGAAGTCACTGGCAAGCCGACTGTCTTCCCGCCTGAGATCGGTTCTACCGCGACAACGGCGGTCGCGGGCAACGATGCACGCCTGACCAACGCTCGGACGCCCACAGCGCATACACACACCGTTTCGGAACTGTCTGATGCGAGCACTGTGGCGAAGACGGCACTCGTGGCTGCCGACGCGGCCACGTTCCGCTCAGCGATCGGAGCGGGGACTGGCAACAGCAACCTGGCAATCGGCACCACGAGCACCACTGCGAAGGCCGGTGACTACCAGCCGACGTGGGCACAGGTGACGGGCAAGCCGACCACCTTCGCTCCGATCATCGGTTCCGGTGCGGCAGATGCAGTTGCGGGCAACGATGCCCGACTCACCAATGCGCGCACACCAACTGCTCACACGCACTTGTGGGCTGACATCACGGACAAGCCAACGACGTTTGCGCCGATCATCGGGAGTACCGCGACGACAGCAGTTGCCGGTAACGATGCACGACTCACGGATGCACGTGTCCCACTGGACAACAGCGTGACGAATGTGAAGATTCCGGTAGGGGCGGCGATTGATCCAACCAAGCTCGGCACAGGCCGCGTCATTGCAGTCGACGGTGCAGACGCTCCCATCAGCATCATCACGAAGTACCTGTCGCAAGCTCAGTACGACGCGCTCGGGACCAAAGACCCGAACACCGAGTACAACATCATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8a679bc82aeeb424d9e69b91092a34547f71725d45ad94af313b9086d49a607d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50