Protein

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Genbank accession
ARQ94576.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADYSIKTEVHKREREVTIYMTQGEATNIPYEIYLFNDQKALDLTGATVEYRATLPNNKFVNQLIPAAQLDAKKGLIKWLPDKNMTQADGIVDISHFVITFKDGRNIKTRDIVIDISPAPDLSGEEAKTVITQIDDMKNRIVEIGVQADKVEKQVTDIQNEIKNNPEKFRGLKGDKGDQGIQGVKGDKGDAGGSDKISMINYNNSFPPVDYSNADVLNALAPSETKYYAQTANNNPVNVPWSGTSASLAVRMRNNGNAGKEIVYTFTGQTWERVTTNLGATPAIGKWIRTDAGAISEYLQPVSGTFDAEDVLAGSKFEYTVSGNQVTINYAYSLNNVDVPAGDVIVGTLPAGVGTPFSGTARGFIMNVSSGANFGSLRIGASGKVNMNWNSGWKAGSSSYVEGSISYISNTLLPNQLA
Physico‐chemical
properties
protein length:418 AA
molecular weight: 45233,09020 Da
isoelectric point:5,23825
aromaticity:0,08134
hydropathy:-0,36053

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
1–119
G3DSA:2.60.40.3350 Coil
DC_1249
STR
2–412
DC_1249
IPR018913
ATT
4–140
IPR018913
ARQ94576.1
1 418
Architecture
ATT
STR
ATT 1-140 | STR 141-412 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Weissella phage PWc
[NCBI] 		1970788 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Weissella ceti
[NCBI] 		759620 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ94576.1 [NCBI]
Genbank nucleotide accession
KY744240.1 [NCBI]
CDS location
range 27120 -> 28376
strand -
CDS
ATGGCAGATTACAGCATTAAAACAGAAGTTCACAAGAGAGAGCGAGAAGTTACCATTTACATGACACAAGGGGAAGCAACAAATATCCCTTATGAAATTTACTTGTTTAATGACCAAAAAGCACTAGATTTAACGGGTGCGACAGTCGAATATAGAGCGACATTACCAAATAACAAGTTTGTAAATCAACTTATCCCAGCTGCACAATTAGACGCTAAAAAGGGACTGATTAAATGGTTACCCGATAAGAATATGACACAAGCTGATGGTATTGTAGACATTTCGCATTTCGTTATCACATTTAAAGATGGTAGAAATATCAAAACTCGTGATATTGTTATCGACATTTCTCCAGCTCCTGATTTAAGCGGGGAAGAAGCGAAGACAGTTATCACCCAAATTGATGACATGAAGAATAGAATTGTTGAGATTGGTGTACAAGCTGATAAGGTTGAGAAGCAAGTAACCGATATTCAAAACGAAATTAAAAACAACCCTGAAAAGTTTAGAGGGTTGAAAGGTGACAAGGGAGACCAAGGTATTCAGGGTGTAAAGGGGGATAAAGGAGACGCCGGGGGTTCTGACAAAATTTCCATGATTAACTACAACAATTCTTTTCCACCCGTTGATTATTCAAACGCCGATGTATTGAACGCTTTAGCGCCTTCTGAAACAAAATATTACGCGCAAACAGCTAATAACAACCCTGTGAATGTTCCGTGGAGTGGTACAAGTGCAAGTTTAGCTGTTCGTATGCGTAACAACGGTAACGCGGGAAAAGAAATTGTATACACGTTCACGGGTCAAACATGGGAGAGAGTTACTACCAACTTAGGTGCAACACCAGCGATCGGAAAATGGATTAGAACTGACGCTGGTGCTATTTCTGAATACTTGCAACCAGTCTCTGGTACATTTGATGCGGAAGACGTATTAGCGGGTTCTAAATTCGAGTACACGGTATCTGGTAATCAGGTAACAATCAATTACGCATACTCACTAAATAACGTCGATGTACCCGCTGGAGATGTTATTGTGGGTACTCTCCCGGCTGGTGTAGGTACACCTTTTTCTGGTACTGCACGAGGGTTTATTATGAATGTATCGTCTGGAGCTAATTTTGGAAGTCTAAGAATTGGTGCGTCTGGTAAAGTGAATATGAACTGGAACTCTGGTTGGAAAGCAGGGTCTTCTTCATATGTTGAAGGTTCTATTTCATACATTTCTAATACACTGTTACCTAATCAATTAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ecf269dbf709d5bcf244cb03a8a4c55bc37106fe6e6d1e3e3c6a89734e4bf6be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and comparative genomic analysis of novel virulent bacteriophage of newly emerging pathogen, Weissella Ceti, infecting Rainbow Trout Truong,H.D., Nishiki,I. and Yoshida,T. 2018-03 — GenBank