Protein

View in Explore
Genbank accession
AUR81924.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MISTIFSKSDPAIGGVTFDCIFNETMEASYESTDYSVESGAVYQDHIRKLPKMISMRVAVSDTPFAGPLGSLLATGAGYVGSKLPPLVTGIAGTAASLFNASNSAATPDTRSAAAWQAMIEAADKMDVFEVVTTKGIYQNYHIKKIYYECNPDNENSIEIIIDMKEVRTFQSNIESGQPSKAQLRTGTSESIQAAPPSKLGGLASEQI
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22233,81660 Da
isoelectric point:4,84697
aromaticity:0,07692
hydropathy:-0,13269

Domains

Domains [InterPro]
DC_1370
STR
1–206
DC_1370
IPR048494
ATT
18–171
IPR048494
AUR81924.1
1 208
Architecture
STR
ATT
STR
STR 1-17 | ATT 18-171 | STR 172-206 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.016.O._10N.286.46.A11
[NCBI] 		1881291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR81924.1 [NCBI]
Genbank nucleotide accession
MG592400.1 [NCBI]
CDS location
range 25072 -> 25698
strand +
CDS
ATGATAAGCACTATATTCAGCAAGTCAGACCCTGCCATTGGCGGGGTTACGTTTGACTGCATTTTCAATGAAACAATGGAAGCTAGTTATGAGTCTACCGATTACTCAGTAGAAAGCGGGGCTGTTTATCAAGACCACATTCGCAAGCTCCCAAAGATGATATCAATGCGAGTTGCTGTAAGTGACACTCCATTTGCTGGCCCTCTAGGTTCGTTGCTTGCTACTGGTGCTGGTTATGTTGGTTCAAAGCTTCCACCACTGGTAACGGGTATCGCTGGTACTGCCGCCTCGCTATTTAACGCATCAAACTCAGCAGCTACGCCGGACACTCGAAGCGCAGCAGCTTGGCAAGCAATGATAGAAGCTGCCGACAAGATGGATGTTTTCGAAGTGGTGACGACAAAGGGTATTTATCAAAACTACCACATCAAGAAGATTTACTACGAGTGCAATCCTGACAACGAAAACTCAATTGAGATCATAATCGACATGAAAGAGGTTCGGACATTTCAGTCAAACATTGAGTCAGGGCAACCAAGTAAAGCTCAATTAAGAACAGGTACTAGCGAGTCAATACAGGCCGCGCCACCTTCAAAGCTTGGAGGGTTAGCAAGTGAGCAGATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3d15b3bff3b3ef1bceaac942ec9e99355c7e277163b0f1d2f41f6a9fd37ea855
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7765
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank