Protein

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Genbank accession
YP_004300576.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANKISTVRTYPLNGAVNFTITFEYLARKFVQVTLIGKDRKELVLNQDYRFTSKTQITTSRTWTAADGYQMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLTADTIGVNNDGHLDARGRKIVNLAFATNDYDAVPLKQVKERESSAWNAVTKANEHADRSNREANRSRDEANRAQREADRATQQAGISTAQAVESKKQADRSNSEANRAKGYADSMTASVAEAKKQADRSNSEANRARDEANRAAGEVTKAAAEVAKAAAHVETAKGHADRANTEANRSKSEADRAKSEADKLGNMNDLAGTIESIGSNGKDINFKGGVNGNTMLAKDSIHAGVQPNTAFLNDNTLRLRNRDHKERAWDIFVWGNNTGRGNVLEFGSNYGKGYGMYLQFGGADSQDAHLQINGSLTTKTNFNADGSIDARGVLQTRSQNLLMINSARRHIQMKTSDSYTDGYLYKDPGAGAWRFNFGQAANREYSFDSNGTLSSSSGWNIPPDGNLYIKKYNLYIDAWVNKRLVEHAYNKTETNNLVNGRLTQAQADGRYIRKNAGWAEVWKGSAGGGVSVGLSQDVRWRTIWIQTRGRWNPVEIGDNGAYYISSHGGWLTFTISNNGRTFRNDGDRASVPTRILVRND
Physico‐chemical
properties
protein length:643 AA
molecular weight: 71077,38800 Da
isoelectric point:9,39190
aromaticity:0,08087
hydropathy:-0,75412

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil Coil Coil G3DSA:2.60.320.30
DC_0657
STR
1–640
DC_0657
YP_004300576.1
1 643
Architecture
ATT
STR
ATT 1-130 | STR 131-640 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004300576.1
1 643
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,8250
Central domain 271 469 200 0,4943
C-terminal 470 643 173 0,8999
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-469
C-terminal
470-643

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 285P
[NCBI] 		669008 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004300576.1 [NCBI]
Genbank nucleotide accession
NC_015249.1 [NCBI]
CDS location
range 33148 -> 35079
strand +
CDS
ATGGCTAACAAAATTTCCACTGTGCGTACTTACCCACTTAATGGTGCCGTGAACTTTACAATCACCTTTGAGTATCTGGCCCGTAAGTTCGTGCAAGTAACCCTAATTGGTAAAGACCGTAAGGAACTGGTTCTCAATCAGGACTACCGATTTACCTCTAAGACGCAAATCACAACCTCTCGTACTTGGACTGCCGCAGATGGCTACCAGATGATTGAGATTCGTCGATTCACTTCAGCTACTGACCGTCTGGTTGACTTTGCTGATGGCTCTATCCTTCGTGCATATGACCTGAACATCTCACAGATTCAGACTCTGCACGTTGCTGAGGAAGCACGAGACCTCACTGCTGATACTATTGGTGTCAACAACGATGGTCACTTAGATGCCCGTGGTCGTAAGATTGTGAACCTTGCGTTCGCTACCAATGACTATGATGCTGTTCCTCTGAAGCAGGTTAAGGAGCGTGAGTCCTCCGCGTGGAATGCTGTTACTAAGGCAAACGAACACGCCGACCGTTCTAATCGAGAGGCTAATCGTTCTCGTGATGAGGCTAACCGTGCTCAACGTGAAGCTGACCGTGCAACTCAACAAGCAGGTATCTCTACGGCACAAGCGGTTGAGTCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGTGCTAAAGGATATGCTGATAGTATGACCGCAAGTGTCGCTGAGGCCAAGAAGCAAGCTGACCGTTCTAACTCTGAGGCCAATCGTGCTCGTGATGAGGCCAATCGTGCTGCCGGAGAAGTGACTAAAGCTGCTGCTGAGGTTGCCAAGGCTGCTGCACATGTTGAGACCGCTAAGGGACATGCTGACCGAGCCAACACTGAGGCAAACCGCTCTAAGAGTGAGGCTGACCGTGCTAAGTCTGAGGCCGACAAGTTGGGTAATATGAATGACCTAGCGGGAACCATTGAGAGCATTGGGAGTAACGGCAAGGATATTAACTTCAAGGGTGGCGTGAATGGGAATACAATGCTTGCTAAGGATTCTATCCATGCTGGGGTACAACCAAACACAGCGTTCCTAAATGATAACACGCTACGCCTTCGCAACAGAGACCACAAAGAGCGCGCTTGGGACATCTTTGTTTGGGGCAACAATACAGGACGTGGGAATGTGTTGGAGTTTGGGTCTAATTATGGTAAAGGGTATGGGATGTACTTGCAGTTTGGTGGGGCTGATTCTCAAGACGCACACCTGCAAATTAATGGCTCGCTTACCACGAAGACTAACTTTAATGCAGACGGTTCAATCGACGCAAGGGGTGTTTTACAGACTCGCTCACAGAACCTGCTGATGATTAACTCTGCTCGTCGGCATATTCAAATGAAAACAAGCGATTCCTACACTGACGGTTATCTCTACAAAGACCCCGGTGCTGGGGCTTGGCGATTCAACTTTGGTCAGGCAGCTAACAGGGAATATTCTTTTGACTCGAATGGTACTCTATCATCTAGCTCCGGGTGGAACATCCCGCCAGATGGGAACCTGTACATCAAAAAGTACAACCTGTATATTGATGCGTGGGTGAACAAACGACTAGTGGAACATGCCTACAATAAGACTGAGACTAACAACCTAGTCAATGGACGATTAACTCAAGCGCAAGCTGACGGTCGATACATTCGTAAGAATGCTGGCTGGGCTGAGGTGTGGAAAGGTTCCGCTGGTGGTGGGGTATCCGTAGGTCTCTCTCAAGATGTCCGCTGGAGAACCATCTGGATTCAAACACGAGGTCGTTGGAACCCGGTTGAGATTGGGGACAACGGGGCTTACTACATCTCATCACATGGTGGGTGGTTGACCTTCACAATCTCCAACAATGGGCGTACATTCCGTAACGATGGAGACAGGGCTTCTGTTCCTACTCGTATCCTTGTACGTAACGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6d69b9f0dd4ec550f6cd6e31a3d6a3ac6d8c499116aba1122ce413699ab7425
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and genomic analysis of 285P, a novel polyvalent Enterobacteriaceae Bacteriophage Ma,X. and Xiong,H. 2014-03-26 — GenBank