Protein

View in Explore
Genbank accession
QMV28796.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSIPFRVTDGLDAAGQKIVNVGYPDINSKMDGVSVDFFVQENTIQLYDATRTYDKNFAVIYDNRIYLSQVDITSPEAFNPVKWKPVRTDPSWKLVTTNAPALTNLSAGDHILAQTISSDVTFTLPTNAINGDVIVIRDNGSNLHDYTIDVSGNGRTISGLASYKITAKNSSNYFILNGSEWFVQTEYAGDVNKSFISNKSYPAGGYYKSIVGDQLMRETRYTGGIKIQLPKYARNGDTITTYDLDGNNPVTKTTVNVHPGSSHNIIVEYGSTPMKTVVFDSTDWGMFVFDSSLNAWRVFDADNLSRWKSVKTSTYLGQPNDRLVVYTETPSTVNITFPRDAARGDSFFIDTRYMKRGSTLTLNIDASSTNDFFVPDGNTLMNPRISAYRDFLANMESNTVKTQSFDIQNRGEQWEFVYFTNALGSGKDVWSVVTMSEIPYRVDRNVPEFYGMAAIASQSSVNKNKEEITTGQNPDCEDFVTAETLANKTASTVRRGITRYASNSESKAVSGNLSDEAWSGVAISPFLLNDRLSTTTMRGLLKVATQSQANAQSGSGENWAQVAVTPSTLNGRVATESMTGLSALVSANGTKPTTRTTPGTGVYDYNDHSKVITPKTLFEKNATEFSQGMVYIANQGEVNTGTADTATGALVVTATTLEGRQATASLTGLSRAATAAEVLSNTPPAGDNVHVSAKGLVSRTATETRWGLSETATQAEVDAGTLHDKWFVTPKTFGNWLARERLTVFDTSGLRTVGNIWEGQSFNIVIPTESQRGTARIATQIEANDMTGTANDEIIVTPKKLSARLATTTQTGLSQIATQSEVDTGTNNTKYLTPLTSLTSTRNSAGYRMTDTRYGVGITAILSNNNSANSVFEGNDILGSTRALTGYAHGDVLVSPRGLNTALANFLPLKAVAVSASAMEVGGNRIPSTDWVRRTIAQTITGEMTFTANPSIEKIRPYFYLNETSTTSHVSMIQWKRQGSNAFLDLGVNTIDGPLILNAMDENSRYYRIFTVERDGNAIFTNQVQNGGQNPTSGNHLVRFAYAEERYVRGPGNFAETITGNKTFVNTTYFKNSGVQNIWMGNTSKSGITINANESLNIGSLGGLQIRPNGLSSPSNTSSFESNGDLKVNAQVKIGSALPIDPDDAIRKDYLDSVIDDMNTTSGSRVFKGGDTMTGELIINSVKALTVNGDSNLNGTTTVNKLRIAVGNGEFLEIRANPTTKSVDFVWIS
Physico‐chemical
properties
protein length:1230 AA
molecular weight: 133443,70850 Da
isoelectric point:5,61140
aromaticity:0,08374
hydropathy:-0,33911

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV28796.1
1 1230
Domain Start End Length (AA) Confidence
N-terminal 1 832 832 0,6809
Central domain 833 1033 202 0,1926
C-terminal 1034 1230 196 0,7858
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-832
Central
833-1033
C-terminal
1034-1230

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AP1
[NCBI] 		2759193 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV28796.1 [NCBI]
Genbank nucleotide accession
MT713136 [NCBI]
CDS location
range 54179 -> 57871
strand +
CDS
ATGTCTTCAATTCCGTTTCGCGTTACCGACGGCTTAGATGCCGCTGGTCAAAAAATAGTTAACGTCGGTTATCCCGATATTAACTCAAAGATGGATGGTGTGAGTGTCGATTTCTTTGTACAAGAAAACACAATCCAACTATATGACGCAACTAGAACATACGACAAAAACTTTGCTGTTATCTATGATAACCGCATATACCTAAGCCAAGTTGATATAACCTCACCCGAGGCATTCAACCCGGTAAAATGGAAACCAGTACGTACAGACCCAAGTTGGAAGCTGGTTACGACTAATGCACCAGCGTTGACGAATCTTTCTGCTGGCGATCACATATTGGCACAGACCATAAGTAGCGACGTAACATTTACCTTACCAACTAATGCTATTAATGGGGACGTTATTGTTATCAGAGATAATGGTTCTAATCTTCACGATTATACCATAGATGTTTCTGGTAATGGAAGAACTATTTCCGGTTTGGCTTCTTATAAGATCACAGCCAAAAATTCATCCAACTACTTCATTTTGAATGGTAGCGAATGGTTTGTTCAAACTGAATACGCTGGTGATGTAAATAAATCATTTATCAGCAACAAGTCGTATCCAGCCGGTGGATATTATAAATCCATTGTTGGTGACCAGTTGATGAGAGAAACCAGATATACTGGTGGAATTAAGATCCAACTACCAAAATACGCCAGAAACGGTGATACTATTACCACATATGATCTTGATGGTAATAACCCCGTAACAAAGACAACCGTAAACGTTCATCCGGGTAGTAGCCACAACATTATAGTTGAATACGGATCGACCCCAATGAAAACTGTCGTTTTTGATTCTACTGATTGGGGTATGTTTGTTTTTGATTCAAGTCTAAACGCTTGGAGAGTTTTCGACGCCGACAACCTTAGTCGTTGGAAAAGTGTCAAAACATCCACATACTTAGGTCAACCAAACGACCGACTAGTAGTTTATACTGAAACTCCGTCGACTGTCAACATTACATTCCCTCGTGATGCGGCAAGAGGTGATAGCTTCTTTATAGACACACGATACATGAAAAGGGGTTCCACTTTAACTTTAAATATTGATGCATCCAGTACAAATGATTTCTTTGTACCAGATGGTAACACTCTAATGAACCCCCGGATCAGCGCATACCGCGATTTTCTTGCTAATATGGAATCAAATACCGTAAAAACTCAGTCATTTGATATCCAAAACCGTGGGGAACAGTGGGAATTTGTGTACTTCACAAATGCTCTTGGTTCTGGTAAAGACGTTTGGTCTGTTGTTACTATGTCTGAGATTCCGTATCGAGTAGACCGAAATGTACCAGAATTTTATGGTATGGCTGCCATTGCATCTCAATCATCTGTAAACAAGAACAAAGAAGAGATCACGACAGGTCAAAACCCAGATTGTGAGGATTTTGTTACCGCAGAAACATTGGCTAACAAAACAGCAAGTACCGTCCGGCGTGGTATCACCCGATATGCATCTAATAGTGAATCAAAGGCAGTTAGTGGAAACCTATCCGATGAAGCATGGTCCGGGGTGGCAATAAGCCCGTTCCTGTTGAACGACCGTCTATCTACAACAACAATGCGTGGTTTGTTGAAGGTAGCGACACAGAGTCAAGCAAACGCACAATCCGGTTCCGGTGAAAACTGGGCTCAGGTTGCGGTCACACCATCTACCCTTAACGGTAGAGTTGCCACAGAGTCCATGACTGGTTTATCGGCTCTTGTCTCAGCTAATGGAACTAAGCCTACCACAAGAACAACTCCGGGTACAGGTGTTTATGATTATAATGATCATAGTAAGGTAATCACTCCGAAAACTCTATTTGAGAAAAACGCAACTGAGTTTTCACAAGGTATGGTGTACATTGCCAACCAAGGGGAGGTTAACACAGGTACTGCTGACACCGCAACCGGTGCGCTAGTAGTAACCGCAACTACCCTAGAAGGACGTCAGGCTACAGCATCACTAACCGGGTTGTCAAGGGCTGCAACCGCAGCAGAAGTACTTAGCAACACTCCACCGGCTGGTGACAACGTACACGTTAGCGCAAAAGGGCTTGTAAGTAGAACCGCAACAGAAACCCGTTGGGGTTTGTCCGAAACCGCAACACAAGCGGAAGTAGATGCAGGGACATTACATGACAAATGGTTTGTTACTCCAAAAACGTTTGGTAACTGGTTAGCTAGAGAAAGACTGACTGTGTTCGATACATCGGGACTTAGAACCGTTGGTAATATTTGGGAAGGTCAATCTTTTAATATCGTTATTCCTACTGAGTCACAACGAGGTACTGCGAGAATTGCAACCCAGATCGAAGCAAACGATATGACCGGAACTGCAAATGACGAAATTATCGTAACTCCAAAGAAACTGAGTGCGAGATTGGCAACAACAACCCAAACTGGTTTGTCTCAAATTGCAACACAATCTGAGGTTGATACCGGTACTAACAATACAAAATATCTAACCCCGTTAACCTCTCTAACCAGTACTAGAAATAGCGCTGGGTATAGAATGACGGATACCAGATATGGTGTTGGTATTACTGCGATATTGTCAAACAATAACTCTGCTAACTCTGTGTTTGAAGGTAATGATATTCTTGGTTCTACAAGAGCATTAACCGGTTACGCACATGGGGATGTATTGGTTTCTCCAAGAGGTTTGAATACAGCATTAGCTAATTTCCTACCACTTAAAGCTGTGGCTGTAAGTGCCAGTGCAATGGAGGTTGGTGGAAACCGTATACCTTCAACTGATTGGGTTCGTCGTACTATTGCACAAACAATAACCGGCGAAATGACATTTACTGCAAATCCGTCTATTGAGAAGATTAGACCTTATTTCTATCTCAACGAAACATCGACTACATCTCATGTATCCATGATCCAGTGGAAACGTCAGGGTAGCAATGCGTTTTTAGATCTTGGTGTAAACACGATTGATGGTCCATTAATCCTTAACGCAATGGACGAAAACAGTAGATATTATAGGATCTTTACTGTTGAACGGGATGGTAATGCAATATTCACCAACCAAGTTCAAAACGGCGGACAGAACCCAACGTCTGGGAACCACCTTGTTCGTTTTGCTTATGCAGAAGAAAGATATGTTCGTGGACCGGGTAACTTCGCAGAAACTATTACCGGTAACAAGACTTTTGTTAATACTACATATTTTAAGAACAGCGGTGTCCAAAATATATGGATGGGTAATACTTCTAAGAGTGGGATAACCATAAACGCAAACGAGAGTTTGAATATTGGTTCTCTTGGTGGATTACAAATTCGCCCTAATGGTCTATCTTCGCCATCAAATACATCATCGTTTGAATCGAATGGTGACCTAAAGGTAAATGCTCAAGTTAAGATAGGAAGTGCATTACCGATTGATCCTGATGATGCAATTCGTAAAGACTATCTGGATTCCGTGATAGACGATATGAATACTACATCTGGTTCTCGTGTGTTTAAGGGTGGTGATACCATGACAGGCGAGCTTATCATCAATTCGGTGAAAGCGCTAACCGTAAATGGTGATTCTAACCTGAATGGAACAACAACCGTAAATAAACTTAGGATAGCAGTTGGTAACGGAGAATTCTTAGAAATAAGAGCAAACCCAACTACCAAGTCTGTTGACTTTGTTTGGATCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b486eb3d4f912afeba42a1a2b67748eeb48b9198a3d362fac0fb07363cc4fc9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5476
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila phage AP1 Baliga,P., Puneeth,T.G., Shekar,M. and Girisha,S.K. 2022-01-07 — GenBank