Protein

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Genbank accession
AWD90290.1 [GenBank]
Protein name
tail fiber adhesin
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQLGRYTAKINGRIVSSNLPKPFVGPKPTNADILRLEVALMSLPGVDTSGGNVQHYFSDGLYARKLMLPAGSAIVGKIHLNGQINFLMKGTIRVTTDTGVEELTAPQIVVTGPGTKRAGYAITDVEWVTVSATDETDLDKIEDSIIAKSFDDPRLLIKLEALCLGEP
Physico‐chemical
properties
protein length:167 AA
molecular weight: 17951,49390 Da
isoelectric point:5,67614
aromaticity:0,05389
hydropathy:0,00299

Domains

Domains [InterPro]
DC_0531
STR
17–155
DC_0531
IPR014710
Unmapped
41–140
IPR014710
IPR011051
Unmapped
55–155
IPR011051
AWD90290.1
1 167
Architecture
STR
STR 17-155 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage Amaethon
[NCBI] 		2163629 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Dickeya dadantii
[NCBI] 		204038 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWD90290.1 [NCBI]
Genbank nucleotide accession
MH059635.1 [NCBI]
CDS location
range 34175 -> 34678
strand -
CDS
ATGCAATTAGGTAGATATACTGCCAAGATAAATGGTCGTATAGTTAGTTCTAATTTGCCTAAACCTTTTGTTGGGCCTAAGCCGACTAACGCCGACATATTGCGCCTGGAAGTTGCTTTAATGAGCCTTCCGGGCGTTGACACATCTGGAGGAAATGTACAACATTATTTTTCAGATGGTTTATATGCCCGCAAATTAATGCTACCTGCTGGTTCTGCAATAGTAGGTAAAATTCATTTGAATGGACAGATTAATTTCCTTATGAAAGGTACTATCCGTGTTACTACAGACACAGGTGTAGAAGAATTAACTGCACCTCAAATAGTAGTAACAGGTCCAGGCACAAAACGTGCTGGTTATGCAATCACAGATGTCGAATGGGTTACTGTGTCTGCAACTGATGAGACAGACTTGGACAAGATAGAAGACTCTATCATAGCAAAGTCATTTGATGACCCTCGTCTATTAATCAAATTGGAGGCTTTATGTCTTGGGGAGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb7aec0b8035c5e097a10004acd9c9fadaf0dcedaa0d3ebb7338f6579aaa0e1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy in agriculture - a green tech approach to combat plant pathogenic bacteria Carstens,A.B., Djurhuus,A.M. and Hansen,L.H. 2021 — GenBank