Protein

View in Explore

Genbank accession

XQU50024.1 [GenBank]

Protein name

TolB

RBP type

Evidence RBPdetect2

Probability 0,61

Protein sequence

MSNQFNYNLNSINFFIQENSGSITGVSTEFEDYGDVQGLPVQTAGQVWLPEREESIHDFSFNDVKFFNTFDSELTRFDTNLELEDWGADLNITETLYPFGTLSSANLAGLAESFNVSISGLAILFRAIGNLGISFTPRYPASGTATLSGDGGIRRERDFIASGTLFKFGTAGESKSFDFVGSGLKTLSGVAVERTAIGRDENTILFDFLDAAETAPVVVWGVDDEVGGTITILGELTHPDIDYTPHYGIEKNIGIGTTGIQISGTTSALEAFSAQTPEDTILFSFGSAAVEKFGGDPPENAQLFSFSGEIEIPLRTFAEQPTGTLNVSGEALEKQEFRYRGRGPINVGVPFSYTDTYDLGLSGSFAETFIAQFGSAIAATENKVIIGAPGNDGSGSYYAGSAYIYNHDGTGITTVTSDGGTDYFGTSVGASTSVTLRDGVYSPAFAVGAYQDQSQGRVYVFDESGNQLVVIDPNPNSFGEYFGWSVAAGSERIVVGSPRDDDNGTDSGSVSVAAVSYNNGSSSWEYTLTKIVPSDGAAGDNFGDAVAVGDDKIVVGCKNNRSNRGAVYVYDLDGTNEIKITASNEDVNFNFGSWVAIGSNKIAVGAPGVHGNKGAVYLYDLDGNNEKIIEASDQAVGRYFGTRVAINGNQLAVGADPAVYGAVYIYTLEGTKEFKITHDTINERFGEAVEFVGDDLWVGARYTSDPEFYTGKVHKYTRNVLQAATEAFSAQTPEDTILFNASGEAIKKATIREVFSGVLTFSGAATNEQFTGDPPEETILFVANGDAHTTRARDKVGTGLASLSGIASCREIANYGYYGDDRDPGTSGLITISGSPLADPDSGVTYIPHYGIERNIGVGTTGIQIEPRTRFGFNTGFDADGNERGARYYSNVYPRNDVAELDGGSGTGGFRLNDDKELTFCRALLPYKASGLGVFSGTGNEAFCIVGYEGDAGTTFFSGAAETRQIDVFGFYGDDADPGTTGLFTISTQTQGIVFRRSFAHLAEGSLFATGGNSDIQLTYGYQGEGQVSTLSGAAEAFGADEVQNVVLYETHGHGTESFVAQPTEDTAQFTYQGQLESERTTKSYLGQVAFPTTIGGAAESIERNVVGTVLFSFDTGTTDSEVRKVDSSISVDRDDVAFNAFVKQTEDVARTILFDITNSAETVLNTLKVYDGAGSTALSGAYSELKFTAAHVGLGGLAKHGVAVKKQVFGYVGEGSLNTLTGASESFARESTAGTILYSATGSASVRVESDFIYASAGTFLPTGAATETRYVPLYPASGTITLSGELTHPEIQYIPAVTAGGLSTVSGAATVANVIVPFASGRFFSIGSGDEAYARNTYVGIGSMSITDEGSTINDPFRIPRTFTIIV

Physico‐chemical properties

protein length:	1369 AA
molecular weight:	144850,91210 Da
isoelectric point:	4,39169
aromaticity:	0,10957
hydropathy:	-0,14551

Domains

Domains [InterPro]

IPR028994
STR
318–592

IPR028994 IPR013517

IPR013519
RBD
359–414

IPR013519 IPR013519 IPR013517 IPR013517 IPR013517 IPR013519

IPR013519
RBD
369–419

IPR013519 IPR013519 IPR013519 IPR013519

PTHR36220
Unmapped
371–625

PTHR36220

SSF69304
STR
401–681

SSF69304

IPR013519
RBD
478–529

IPR013519

XQU50024.1

1 1369

Architecture

STR

STR 318-681 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR028994	STR	IPR028994	318	592	Merged direct domain	Integrin alpha, N-terminal	Central	Low	Positional only	7 proteins / 7 hits
IPR013519	RBD	DC_0617	359	414	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
IPR013519	RBD	DC_0617	369	419	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
PTHR36220	Unmapped	-	371	625	PANTHER	UNNAMED PRODUCT	-	-	-	-
SSF69304	STR	SSF69304	401	681	Merged direct domain	SSF69304	Central	Low	Positional only	1 proteins / 1 hits
IPR013519	RBD	DC_0617	420	473	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
IPR013519	RBD	DC_0617	467	522	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
IPR013517	STR	DC_0203	478	512	InterPro cluster	FG-GAP repeat	Central	Low	Positional only	2 proteins / 2 hits
IPR013519	RBD	DC_0617	478	529	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
IPR013517	STR	DC_0203	529	570	InterPro cluster	FG-GAP repeat	Central	Low	Positional only	2 proteins / 2 hits
IPR013519	RBD	DC_0617	538	584	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
IPR013517	STR	DC_0203	576	619	InterPro cluster	FG-GAP repeat	Central	Low	Positional only	2 proteins / 2 hits
IPR013519	RBD	DC_0617	587	632	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits
IPR013517	STR	DC_0203	626	666	InterPro cluster	FG-GAP repeat	Central	Low	Positional only	2 proteins / 2 hits
IPR013519	RBD	DC_0617	636	680	InterPro cluster	Integrin alpha beta-propellor	C-terminal	Low	Positional only	2 proteins / 3 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Synechococcus phage S-SCSM2R [NCBI]	3400247	Viruses >
Host	Synechococcus sp. [NCBI]	1131	cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Genbank protein accession

XQU50024.1 [NCBI]

Genbank nucleotide accession

PQ898602 [NCBI]

CDS location

range 87252 -> 91361
strand +

CDS

ATGTCAAACCAGTTTAATTATAATCTTAATAGTATTAATTTCTTCATCCAGGAAAACTCTGGATCGATTACTGGTGTCTCAACAGAATTTGAAGACTATGGTGACGTTCAAGGTCTTCCCGTTCAGACGGCAGGACAAGTCTGGTTACCAGAACGTGAAGAAAGTATTCATGATTTTAGTTTCAATGATGTCAAGTTCTTCAACACCTTCGACTCTGAACTTACTAGATTTGATACTAACTTAGAATTAGAAGATTGGGGTGCAGACCTCAATATCACAGAAACACTATATCCCTTCGGTACATTATCCTCCGCAAACCTTGCTGGTCTTGCGGAGTCTTTCAATGTTTCCATCTCTGGACTTGCAATTCTGTTCAGAGCAATTGGAAATCTTGGAATCAGCTTTACACCCAGATACCCTGCTAGTGGTACAGCGACACTATCTGGCGATGGTGGCATCCGCAGAGAGCGTGATTTCATCGCCAGTGGTACTCTATTCAAATTCGGTACTGCCGGTGAGTCCAAGTCCTTTGACTTCGTTGGCAGCGGTCTTAAGACCCTCTCAGGCGTTGCTGTCGAGCGCACAGCAATCGGTAGAGACGAAAATACTATCCTATTCGACTTCCTCGACGCTGCTGAGACAGCGCCAGTCGTCGTCTGGGGCGTCGATGATGAGGTTGGTGGTACTATCACCATCCTTGGGGAACTTACTCACCCAGACATTGATTATACCCCTCATTATGGTATCGAGAAGAACATCGGTATCGGAACAACTGGTATTCAGATTTCTGGTACTACATCTGCTCTGGAGGCATTCTCTGCACAGACTCCAGAAGATACTATTCTCTTCTCCTTCGGTTCTGCTGCAGTAGAGAAGTTTGGTGGAGATCCACCAGAGAACGCTCAACTATTCTCCTTCAGTGGAGAAATCGAGATTCCTCTCCGTACATTTGCGGAACAACCAACAGGAACACTTAATGTTTCTGGTGAGGCTCTTGAGAAACAAGAATTTAGATATCGTGGTAGAGGACCAATTAACGTTGGTGTTCCATTCAGTTATACAGATACTTACGACCTTGGACTCTCTGGTAGTTTTGCCGAGACGTTCATTGCACAATTCGGTTCAGCTATTGCTGCTACTGAAAATAAAGTCATCATCGGCGCACCAGGTAATGATGGTTCTGGTTCATACTATGCAGGTTCTGCATACATCTATAATCATGATGGAACTGGTATCACGACAGTCACTAGTGATGGTGGTACCGATTACTTCGGAACAAGTGTTGGTGCAAGTACCAGTGTAACACTCAGAGATGGTGTTTACAGCCCTGCATTTGCAGTTGGTGCATATCAGGATCAAAGTCAAGGTCGTGTATACGTCTTCGATGAAAGTGGAAATCAACTTGTAGTTATTGATCCCAATCCAAATAGTTTTGGTGAATATTTTGGATGGTCTGTTGCTGCAGGATCGGAAAGAATTGTTGTTGGTTCTCCTCGTGATGATGACAATGGAACGGATTCTGGTTCAGTATCTGTTGCAGCAGTTTCTTATAACAATGGATCATCCTCTTGGGAATATACATTAACTAAGATTGTTCCTTCCGATGGAGCAGCTGGTGATAACTTTGGTGATGCAGTTGCAGTCGGAGACGATAAGATTGTCGTTGGTTGTAAGAATAATAGATCTAATCGTGGTGCTGTATATGTCTATGATCTAGACGGCACAAATGAAATCAAGATTACCGCAAGTAATGAAGACGTAAACTTCAACTTCGGTTCTTGGGTTGCGATTGGTAGTAATAAGATTGCGGTTGGTGCTCCAGGAGTACATGGTAATAAGGGTGCGGTCTATCTTTACGACTTAGATGGTAATAACGAGAAGATAATCGAAGCCTCTGATCAGGCGGTAGGTAGATACTTTGGTACTAGAGTTGCAATTAATGGCAATCAACTTGCTGTTGGTGCCGATCCAGCTGTTTATGGTGCAGTTTATATCTACACCCTTGAGGGAACTAAGGAATTCAAGATCACTCACGATACAATCAATGAAAGATTCGGTGAGGCTGTTGAATTCGTTGGTGACGATCTCTGGGTTGGTGCAAGATATACATCTGATCCAGAATTCTACACGGGTAAAGTTCACAAATACACCCGCAATGTTCTTCAGGCAGCTACAGAAGCATTCTCTGCACAGACTCCAGAAGATACGATTCTATTCAATGCTTCTGGCGAAGCAATCAAGAAAGCAACTATCAGAGAAGTATTCTCTGGTGTTCTTACATTCTCTGGTGCTGCAACCAACGAACAATTCACTGGAGATCCTCCAGAAGAGACAATTCTCTTCGTTGCAAATGGTGATGCTCATACAACCAGAGCAAGAGATAAGGTCGGAACAGGTCTTGCATCTCTATCTGGTATTGCTTCTTGTAGAGAAATTGCAAATTATGGTTATTATGGAGATGATAGAGATCCTGGTACATCTGGTCTCATCACAATCTCTGGTTCTCCACTAGCAGATCCAGACTCTGGTGTAACTTATATCCCACATTATGGTATTGAAAGAAATATCGGTGTTGGAACCACTGGTATTCAGATTGAACCTAGAACTAGATTTGGTTTCAATACTGGATTTGACGCCGATGGTAATGAGCGTGGTGCAAGATACTACTCTAATGTCTATCCACGTAATGACGTTGCGGAACTCGATGGTGGTTCTGGTACTGGTGGATTCAGACTTAATGATGATAAAGAACTCACATTCTGTAGAGCACTACTTCCATATAAGGCATCTGGTCTTGGTGTATTCAGTGGAACTGGTAACGAAGCCTTCTGTATTGTTGGATATGAAGGTGATGCAGGAACCACATTCTTTAGTGGTGCTGCAGAAACCAGACAGATTGATGTCTTTGGATTCTATGGAGATGATGCAGATCCAGGAACAACTGGTCTGTTTACTATCTCTACTCAGACTCAGGGTATCGTATTCAGAAGAAGTTTCGCACATCTAGCGGAAGGTTCTCTGTTTGCAACTGGTGGAAACTCGGATATTCAACTTACATATGGATATCAGGGCGAAGGTCAAGTATCTACACTTTCTGGAGCTGCGGAAGCATTCGGTGCGGACGAAGTACAGAATGTTGTTCTTTACGAGACTCATGGTCATGGTACCGAGAGTTTTGTTGCACAACCAACCGAAGATACGGCACAATTTACGTATCAAGGTCAACTCGAATCGGAAAGAACAACCAAGTCCTACCTTGGTCAAGTTGCATTCCCAACAACAATTGGTGGGGCAGCAGAATCTATTGAAAGAAATGTCGTCGGAACAGTTCTGTTCTCCTTCGACACTGGAACGACAGATTCTGAAGTTAGAAAAGTTGATTCTAGTATTTCTGTTGATAGAGACGACGTTGCATTCAATGCATTCGTCAAACAGACTGAAGATGTTGCGAGAACTATTCTCTTCGATATTACAAATTCTGCAGAAACAGTACTCAATACTCTCAAAGTATACGATGGTGCTGGTTCAACTGCACTATCTGGTGCATATTCAGAACTCAAGTTCACTGCAGCACATGTTGGTCTTGGTGGACTTGCAAAACATGGAGTTGCAGTCAAGAAACAAGTATTTGGTTATGTGGGCGAAGGTTCCCTCAACACACTTACTGGAGCTTCCGAAAGTTTCGCGAGAGAATCTACTGCGGGAACGATTCTTTACTCCGCGACTGGTTCTGCATCGGTCAGAGTCGAGAGCGACTTTATCTACGCCAGCGCAGGAACATTCCTACCAACAGGAGCAGCAACAGAAACCAGATATGTTCCCCTCTACCCCGCTTCTGGAACAATCACTCTTTCTGGAGAACTCACTCATCCAGAGATTCAATATATTCCCGCAGTTACAGCTGGTGGACTATCAACAGTATCTGGAGCTGCAACAGTTGCGAACGTTATCGTACCATTTGCATCTGGTCGTTTCTTCAGTATTGGATCTGGAGACGAAGCATACGCAAGAAATACTTATGTCGGTATCGGAAGTATGAGTATTACCGACGAAGGTTCAACTATAAACGATCCATTCAGAATTCCACGCACATTTACCATCATCGTTTAA

Genome Context

Tertiary structure

PDB ID

c9f1a150a509aeb66a533975a2727eb4b93c5768fdde270cd846411c42403c89

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,4577

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Unveiling a novel broad-host-range cyanophage cross-infecting Prochlorococcus and Synechococcus hosts	Wei,S., Cai,L., Zhang,R., Xu,Y. and Li,J.	2025-12-09	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature