Protein

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Genbank accession
XPK38657.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MYNNKFKVGELLHKRSPFSKTWINFDGSYTMEQYEEAVHYTDAGGQLRTVNPMLSREASTDDFQGIKVPFDVRVPHLFTSGYSIGHGEEFLTFTPVGARRVKGTVNSDKLNEVLYRSAWTSTDVKLEVTATGLKETLILKSEKAPTTFMFEVEENINAFELENLQLAPAWLLDANGVYRDVEQELTVEDEKTFVTLNVDTDGLKYPIEVDPTIWVNNLVNSKANNVVMSNTSDSVYNNEQSTALIYNDIRRIYMKWPDMIKNVSTDAKITSAKLTVYASAFEGVLKFRAHAVSSDYNPDTLTWRSQPLISDNLISPEVTLQVGSPSWNDIDITSIVQAKLDGTQVSAIVLKSSSLSSGGNATIALANNPYSGTRPFITVDFNAPPGRPVVTRPNGGETIAGAQAIEWTAANDLRDFTLDPFPMNDAIIYSSKLAFGQSFTMQADNAKVKRIYLRAGVSNSGIAYKMSLYHCSGTTGYWLADRSRLVATGM
Physico‐chemical
properties
protein length:490 AA
molecular weight: 54292,42450 Da
isoelectric point:5,20443
aromaticity:0,09796
hydropathy:-0,26429

Domains

Domains [InterPro]
DC_1925
STR
3–468
DC_1925
NF033679
Unmapped
224–379
NF033679
IPR055372
CBM
247–357
IPR055372
XPK38657.1
1 490
Architecture
STR
STR 3-468 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK38657.1
1 490
Domain Start End Length (AA) Confidence
N-terminal 1 213 213 0,7250
Central domain 214 442 230 0,5051
C-terminal 443 490 47 0,8326
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-213
Central
214-442
C-terminal
443-490

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage BCE1
[NCBI] 		3385044 No lineage information
Host Bacillus sp.
[NCBI] 		1409 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK38657.1 [NCBI]
Genbank nucleotide accession
PQ655445 [NCBI]
CDS location
range 33214 -> 34686
strand +
CDS
ATGTATAACAACAAATTTAAAGTCGGAGAGTTGCTGCATAAGCGCTCTCCGTTTTCTAAAACATGGATCAACTTTGACGGCTCCTACACAATGGAGCAGTATGAGGAGGCTGTCCACTATACGGACGCAGGCGGACAACTTAGAACGGTCAACCCTATGCTATCCAGGGAAGCATCTACAGACGACTTTCAAGGGATCAAAGTACCGTTTGACGTACGCGTTCCGCACTTATTCACTTCAGGATATTCTATTGGCCACGGTGAGGAGTTCCTAACATTTACGCCTGTAGGTGCAAGACGTGTGAAAGGTACAGTTAATTCTGATAAGTTGAATGAGGTACTGTACAGAAGTGCCTGGACAAGCACAGACGTTAAACTAGAAGTAACGGCAACGGGATTAAAAGAAACGCTCATACTTAAAAGTGAAAAAGCGCCTACGACTTTCATGTTTGAAGTTGAGGAGAACATAAACGCCTTTGAACTAGAGAATTTGCAACTTGCTCCAGCCTGGTTACTTGATGCAAACGGAGTGTACAGAGACGTAGAACAAGAGCTAACTGTAGAGGACGAGAAAACATTTGTAACACTAAACGTTGATACGGACGGCCTGAAATACCCGATTGAAGTTGACCCGACAATATGGGTAAACAACTTAGTAAACAGCAAGGCAAACAACGTCGTAATGTCTAACACTTCAGATAGCGTATACAATAACGAGCAGTCCACAGCGTTAATATATAATGATATACGCAGGATTTATATGAAATGGCCTGACATGATTAAAAACGTTTCTACAGATGCAAAAATAACAAGCGCCAAATTAACTGTTTATGCAAGTGCTTTTGAGGGCGTACTTAAATTTAGAGCGCACGCTGTTTCATCCGATTACAACCCTGATACTTTGACGTGGCGATCCCAGCCGTTAATATCGGATAACTTGATATCTCCTGAAGTTACTTTACAGGTAGGCTCTCCGAGCTGGAATGATATAGATATCACAAGCATTGTACAGGCCAAACTAGACGGTACACAAGTAAGTGCTATCGTGCTAAAGTCTTCTAGCCTAAGTTCAGGTGGTAACGCTACAATAGCACTAGCAAATAACCCGTACTCTGGTACACGTCCATTCATTACGGTTGACTTTAATGCTCCTCCTGGTAGACCTGTGGTAACACGTCCAAACGGCGGAGAAACGATAGCGGGTGCACAAGCAATTGAGTGGACAGCAGCGAACGATCTTAGAGACTTTACGCTTGATCCGTTCCCTATGAACGATGCGATCATATACAGCAGCAAACTTGCATTCGGTCAATCTTTCACTATGCAAGCGGACAACGCTAAAGTTAAACGTATCTATTTACGAGCAGGCGTGTCAAACTCTGGCATAGCTTATAAAATGTCACTTTACCACTGTAGCGGTACTACAGGCTACTGGTTAGCTGATAGATCGCGGCTAGTGGCTACGGGGATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1fed30185ccbe62742c5c6cb2a3d2a4f4701643a65008b2b79fd844e52d19165
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50