Protein

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Genbank accession
XRQ87593.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MEPTTILMVVSAAISVATAIYSANLVGDTDQSDFGASVTKTGTTATKNPVYGKCRISSVNVYNNVSDTNSEDLLSVFSFGIGPMEAVHQIYIDEIEAIAEGTYTTNPNGDETQLEFGGIGNFASQNVRIQIRSGAETEVGLSLAINNSDGEWTLNHRGDRCGQAAVKVRRVIDDEGARILSPTFSLSALVSGLKVYDPRIHQNPSQKAFSRNVALCILDYITDSYYGMGIDLKYIDLQSFIDTANWCDSNSLYIDAEINSAQAFSETLGKMIACFGGIIVAEDGYIKLLYDDIALPKYAFDEDNIVGDGIRVTNQNSSGYYNVVEASYKNFKMDEKEDIYTLPKSIATDPRIARDGYTKSTKLELPYVIDGRRDDGVPNGAVKFLTNRMYRRSDFQKRVDFDIDLLDYPVKIYDVIEVSNDHYGWDRKLWRVISKNKTIDEEKLNIATISCEEYDDSIYTGSQDGGAGKPLPKPPTLTPPTNLQFNLQTYITSGYGELTWDNTSFGPSNETQIDYKLSSDIGWTRLGRTPYTIWKVANLAADTYSFRVRTYNPAIGTSDWTELNDVVISPNVILPSVTGLTCDTTSSTFEFTWDSMLDSIVAPIGGPDSGGSDGTVGTWFSHYQVDIFHWENGSFAFKKSYNTTAPEYKYTLAENKLNGINRRVRADVYIVAKDSSKSQIGAGSTFDATNQQSAQVQGLDISGKIAMIWTEFSLNEEPDFIGTEIHMSTTSGFTPNASTLVTVLGNETFNVWYFPDGSDASSYRYVRVGHFDVFGNDGIIYSPQVRADYNSIDNEITPFDPTDLQNQIDENKQLMDGIDDKFSEYIPDISDQLASLRDPNNAPVKTGTTTPISERINIVASANKSQTAGFGLYALNDGTSQMIIAADELIIGGGAGGVNTTIGFYYDSVGNELLLNNATIKNLTATSIAAGTITANEIATGTITALEIAANTITSNEIKAGTIQASDIAANTITANEIAASTITAAEIQANTITGNKISSSTTIIAGSGSTQAGMNGSDASGTYQYWRFWAGSSTPSSAPYRVYRDGRLWATNADVTGIIRATSAYLTGTMRVGVGTTTSNYVDILGGGTAGGNDQRFLRVQDGGYERVRWDYDGRLRMSSGSSNVNGTNNVVDFDPVAGTFKFRGNVFADAFVGDVITKRVKAWSAFSADYPGLENIAIPLTTFNTNTKVPYRRSFDWDAGTGISTGINRGVLLQLASGGAGSRRGNWQLVVMDLTNGTEQTIDSGTYTLDSGTPGKYFGFSVRNFMLNQQPAPNDYISTNTSYRIEFRTQGTFDADTLQVRLEAGDGLMEMYRDSQEFS
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 143979,63020 Da
isoelectric point:4,57539
aromaticity:0,10068
hydropathy:-0,30348

Domains

Domains [InterPro]
DC_0187
STR
1–703
DC_0187 DC_0140
IPR036116
STR
479–567
IPR036116
XRQ87593.1
1 1321
Architecture
STR
STR
STR 1-703 | STR 713-1314 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRQ87593.1
1 1321
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,8944
Central domain 91 289 200 0,1195
C-terminal 290 1321 1031 0,3029
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-289
C-terminal
290-1321

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage V6Aob
[NCBI] 		3415737 Viruses > unclassified bacterial viruses >
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRQ87593.1 [NCBI]
Genbank nucleotide accession
PV454620.1 [NCBI]
CDS location
range 25402 -> 29367
strand +
CDS
ATGGAACCGACCACAATTTTGATGGTTGTGTCTGCTGCAATATCGGTTGCTACTGCAATTTATTCAGCAAATCTAGTTGGTGATACGGATCAATCAGATTTTGGTGCATCGGTAACGAAAACTGGCACGACCGCAACAAAGAATCCAGTATATGGGAAATGTAGAATAAGCTCAGTTAACGTATACAACAACGTATCTGACACAAATAGCGAAGATTTGTTATCTGTGTTTAGTTTCGGTATAGGTCCGATGGAAGCCGTACACCAAATCTACATCGATGAAATTGAGGCGATTGCTGAAGGAACTTACACAACTAACCCAAACGGCGATGAAACCCAATTGGAGTTTGGTGGCATTGGTAATTTCGCATCACAAAACGTGAGAATCCAAATCCGTAGTGGTGCCGAAACTGAGGTTGGGTTAAGTTTAGCCATAAACAACTCAGATGGTGAGTGGACGTTAAACCACAGGGGAGACCGATGTGGTCAGGCGGCAGTTAAGGTTCGGCGAGTGATTGACGATGAGGGCGCTAGAATCCTAAGCCCAACATTCTCATTATCTGCTTTAGTGTCCGGTCTGAAGGTATACGATCCTCGCATCCACCAAAACCCATCACAGAAGGCATTTAGTAGAAACGTCGCTCTATGTATATTGGACTATATCACCGACAGTTACTATGGCATGGGGATCGACCTCAAATACATCGACCTGCAATCATTTATCGACACTGCCAACTGGTGTGATAGTAACAGCCTATACATAGACGCAGAAATTAATTCAGCACAGGCATTCTCCGAAACTTTGGGTAAGATGATTGCATGTTTTGGTGGTATTATTGTCGCCGAGGATGGATACATTAAGCTTCTTTATGATGATATCGCTTTACCAAAATATGCATTTGATGAGGATAATATCGTAGGTGATGGCATTCGAGTAACTAACCAAAATTCTAGTGGCTACTATAATGTCGTGGAGGCATCGTACAAAAACTTTAAAATGGATGAGAAGGAAGACATTTACACGCTTCCAAAATCCATCGCAACCGATCCAAGGATTGCGCGAGACGGATACACAAAGTCGACGAAACTTGAGTTACCATACGTAATTGATGGAAGACGAGATGATGGTGTACCAAACGGAGCAGTCAAGTTCCTAACAAACCGCATGTATCGCAGATCTGATTTCCAAAAACGAGTTGATTTTGATATAGATTTGCTGGATTATCCGGTGAAAATTTATGACGTAATCGAAGTTAGTAATGACCATTACGGATGGGACAGAAAGTTATGGCGAGTTATATCGAAGAATAAAACAATAGACGAAGAAAAACTCAACATCGCAACAATTTCATGTGAGGAATACGACGATAGCATCTACACAGGAAGCCAAGACGGAGGGGCAGGTAAGCCATTACCAAAACCACCAACTCTAACTCCACCCACAAACCTACAGTTCAACCTACAAACCTATATCACGAGCGGTTATGGTGAGCTGACTTGGGATAACACATCATTCGGACCATCAAACGAAACTCAAATCGATTACAAACTATCATCGGATATAGGGTGGACTCGTTTGGGGCGCACACCATACACGATATGGAAGGTTGCTAATTTGGCTGCTGACACATATTCGTTCCGAGTTCGCACATATAATCCAGCAATAGGAACATCAGACTGGACGGAACTTAATGATGTGGTGATTTCCCCTAATGTAATATTGCCGTCGGTTACAGGGCTTACATGCGACACAACATCAAGCACATTCGAATTCACATGGGATTCTATGTTAGATTCTATCGTCGCACCTATAGGCGGTCCTGATAGCGGTGGTTCTGATGGTACTGTTGGTACATGGTTTTCCCACTATCAGGTGGATATATTCCACTGGGAGAACGGGTCGTTTGCATTCAAGAAATCGTACAACACGACAGCACCGGAGTATAAATACACGCTAGCAGAAAACAAACTGAATGGTATAAACCGCAGAGTTCGAGCTGATGTATATATCGTAGCGAAGGATTCTTCAAAATCGCAAATCGGTGCTGGTAGTACGTTCGATGCAACCAACCAACAATCAGCGCAAGTGCAGGGGTTGGACATATCCGGCAAGATTGCAATGATTTGGACCGAATTTAGTCTAAACGAAGAACCAGATTTTATCGGAACAGAAATCCACATGTCAACCACTAGTGGGTTTACGCCAAACGCATCAACTTTGGTTACGGTATTGGGCAACGAAACCTTCAATGTATGGTACTTCCCTGATGGCTCCGACGCATCATCATATCGTTATGTTCGTGTGGGGCATTTTGATGTATTCGGAAATGATGGAATAATTTATAGCCCGCAAGTTAGAGCGGATTACAATTCAATCGATAACGAAATTACTCCGTTCGACCCAACTGACCTTCAAAATCAGATTGACGAAAATAAACAACTCATGGATGGAATTGATGATAAGTTTAGCGAATACATACCAGATATTTCCGACCAATTGGCATCCTTGAGGGACCCTAATAACGCGCCAGTAAAAACGGGAACCACCACACCAATATCTGAGCGAATTAATATAGTCGCGTCTGCAAATAAATCTCAGACTGCGGGCTTTGGATTGTACGCACTAAATGACGGCACATCACAGATGATTATTGCGGCGGATGAGTTAATTATTGGCGGAGGTGCTGGCGGTGTTAATACCACCATCGGATTCTATTATGATTCCGTCGGAAATGAGTTACTTCTAAATAATGCAACAATCAAGAACCTAACCGCAACAAGCATTGCTGCTGGCACAATTACAGCAAATGAAATTGCAACTGGCACAATCACCGCGCTGGAAATCGCAGCAAATACCATAACATCTAATGAGATTAAGGCAGGGACGATCCAAGCCAGCGACATCGCAGCAAACACAATAACCGCGAATGAGATTGCCGCATCAACAATCACGGCAGCAGAAATCCAAGCAAACACAATCACTGGCAACAAGATCAGCTCATCGACAACAATCATTGCTGGTTCGGGCAGCACTCAAGCAGGCATGAATGGTAGCGACGCATCAGGCACATACCAATATTGGAGATTTTGGGCTGGTTCATCAACCCCATCATCTGCACCATATAGAGTGTATAGGGATGGTCGTTTATGGGCAACAAATGCCGACGTTACGGGAATCATCAGAGCAACATCTGCATATCTAACGGGAACTATGCGAGTTGGTGTAGGCACAACTACAAGCAACTACGTTGATATTCTTGGCGGCGGAACGGCAGGTGGCAACGATCAACGATTCTTGAGAGTTCAGGATGGCGGATATGAAAGAGTTCGTTGGGACTATGATGGACGATTGAGAATGTCCTCTGGCAGCAGTAACGTGAATGGCACCAACAACGTAGTTGACTTCGATCCCGTGGCTGGAACATTCAAATTCCGTGGGAACGTTTTTGCTGATGCGTTTGTAGGTGACGTAATAACTAAGCGAGTTAAGGCATGGTCTGCATTCAGTGCGGATTATCCGGGATTGGAGAATATAGCAATACCCCTAACAACATTCAATACCAATACTAAAGTTCCTTATCGCAGGTCTTTTGATTGGGATGCGGGCACTGGAATTAGCACAGGCATAAACCGAGGGGTGCTATTGCAATTGGCTTCTGGTGGTGCGGGCAGCCGCCGAGGTAATTGGCAATTGGTTGTGATGGATTTAACTAACGGAACCGAACAAACCATTGATTCTGGTACGTACACATTAGATTCAGGAACCCCCGGAAAGTATTTTGGGTTTTCTGTTAGAAACTTCATGTTAAATCAACAACCAGCGCCCAACGACTACATATCAACAAACACATCATACAGAATTGAGTTTCGTACGCAAGGGACGTTCGATGCCGATACATTACAAGTTAGGTTGGAGGCTGGGGATGGGTTGATGGAGATGTATAGAGACTCCCAAGAATTCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf34608fd9856fe499102365664f712778a8fa3359409a97076f854cd2408a11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6623
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50