Protein
View in Explore- Genbank accession
- XYL46210.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVTVVISSRLRELDSSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQRARRG
- Physico‐chemical
properties -
protein length: 281 AA molecular weight: 30501,14530 Da isoelectric point: 9,61264 aromaticity: 0,09964 hydropathy: 0,90285
Domains
Domains [InterPro]
NF007889
Unmapped
1–281
Unmapped
1–281
IPR035906
STR
8–266
STR
8–266
IPR051789
Unmapped
8–275
Unmapped
8–275
G3DSA:1.10.3720.10:FF:000040
Unmapped
11–271
Unmapped
11–271
IPR035906
STR
11–271
STR
11–271
IPR035906
STR
20–266
STR
20–266
IPR000515
STR
65–260
STR
65–260
IPR000515
STR
81–272
STR
81–272
IPR000515
STR
82–256
STR
82–256
1
281
Architecture
STR 8-272 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
281
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 95 | 95 | 0,3355 |
| Central domain | 96 | 270 | 176 | 0,0771 |
| C-terminal | 271 | 281 | 10 | 0,9847 |
Note: Constraints were applied during segmentation.
Fixed 63 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 63 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-95
1-95
Central
96-270
96-270
C-terminal
271-281
271-281
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage TPL-02 [NCBI] |
3343751 | Viruses > |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XYL46210.1
[NCBI]
Genbank nucleotide accession
PQ338057
[NCBI]
CDS location
range 28002 -> 28847
strand -
strand -
CDS
ATGAATAATTTACCGGTAGTTCGTTCGCCCTGGCGGATTGTGATTTTGCTGTTGGGCTTCACCTTTCTCTACGCGCCAATGCTGATGCTGGTGATCTATTCATTCAACAGCTCGAAACTGGTGACGGTGTGGGCCGGCTGGTCAACGCGCTGGTATGGTGAGTTATTGCGCGATGACGCGATGATGAGTGCGGTTGGTTTAAGCCTGACAATTGCTGCCTGTGCGGCAACGGCGGCGGCGATCCTCGGGACTATTGCGGCGGTGGTGCTGGTGCGCTTTGGCAGGTTTCGCGGATCAAATGGCTTTGCCTTTATGATCACCGCGCCGCTGGTGATGCCAGATGTCATCACGGGCTTGTCGCTGTTGTTGTTATTCGTCGCGCTTGCTCATGCCATTGGCTGGCCTGCGGACCGCGGGATGCTTACCATCTGGCTGGCGCATGTCACGTTCTGTACGGCTTATGTGACAGTCGTTATTTCGTCGCGTCTGCGGGAACTGGATAGCTCGATAGAAGAAGCAGCGATGGATCTCGGTGCGACGCCGCTGAAAGTATTTTTCGTCATTACGCTACCGATGATCATGCCCGCGATCATTTCTGGCTGGTTACTGGCTTTTACTTTGTCGCTTGATGATCTGGTGATCGCCAGCTTTGTTTCTGGGCCGGGAGCCACCACGTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTTGCAACGTTAATTCTCGGTGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGATATCCAGCGTGCAAGACGTGGCTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
d6775279804cf1b501f6d8ed32247d1d86c827f0292dc921f2a49ffa6643b0c4
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50