Protein

View in Explore
Genbank accession
YP_004957428.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MRKLTNFKFFYNTPFTDYQNTIHFNSNKERDDYFLNGRHFKSLDYSKQPYNFIRDRMEINVDMQWHDAQGINYMTFLSDFEDRRYYAFVNQIEYVNDVVVKIYFVIDTIMTYTQGNVLEQLSNVNIERQHLSKRTYNYMLPMLRNNDDVLKVSNKNYVYNQMQQYLENLVLFQSSADLSKKFGTKKEPNLDTSKGTIYDNITSPVNLYVMEYGDFINFMDKMSAYPWITQNFQKVQMLPKDFINTKDLEDVKTSENITGLKTLKQGGKSKEWSLNDLSLSFTKLQEMMLSKKDEFKHMIRNEYMTIEFYDWNGNTMLLDAGKISQKTGVKLRTKSIIGYHNEVRVYPVDYNSAENDRPILAKNKDILIDTGSFLNTNITFNSFAQVPILINNGILGQSQQANRQRNAESQLITSRIDNVLNGSDPKSRFYDAVSVASNLSPTALFGKFNEEYNFYKQQQAEYKDLALQPPSVTESEMGNAFQIANSINGLTMKISVPSPKEITFLQKYYMLFGFEVNDYNSFIEPINSMTVCNYLKCTGTYTIRDIDPMLMEQLKAILESGVRFWHNDGSGNPMLQNPLNNKFRAGV
Physico‐chemical
properties
protein length:587 AA
molecular weight: 68392,67860 Da
isoelectric point:6,44102
aromaticity:0,12606
hydropathy:-0,54446

Domains

Domains [InterPro]
IPR031772
TAS
3–115
IPR031772
DC_0080
STR
84–428
DC_0080
YP_004957428.1
1 587
Architecture
TAS
STR
TAS 3-83 | STR 84-428 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S24-1
[NCBI] 		1010614 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004957428.1 [NCBI]
Genbank nucleotide accession
NC_016565 [NCBI]
CDS location
range 8329 -> 10092
strand -
CDS
ATGAGAAAATTAACAAATTTTAAATTTTTCTATAACACGCCGTTTACAGACTATCAAAATACGATTCATTTTAATAGTAATAAAGAGCGTGATGATTATTTTTTAAACGGTCGTCATTTTAAATCATTAGACTATTCCAAACAACCATATAATTTTATACGTGATAGAATGGAAATCAATGTTGATATGCAGTGGCATGACGCACAAGGGATTAACTACATGACGTTTTTATCAGATTTTGAGGACAGACGCTATTACGCTTTTGTGAATCAAATCGAATACGTGAATGATGTTGTGGTAAAAATATATTTTGTGATTGATACTATTATGACGTATACACAAGGTAATGTATTAGAGCAACTCTCAAACGTTAATATTGAACGTCAACACTTATCAAAGCGTACGTATAACTATATGTTACCAATGTTACGTAACAATGATGATGTATTAAAAGTATCGAATAAAAACTATGTGTATAACCAAATGCAACAGTATTTGGAAAATTTAGTGTTATTCCAGTCAAGCGCTGATTTATCAAAGAAATTTGGTACGAAAAAAGAGCCAAACTTAGATACGTCTAAAGGTACGATATATGACAATATCACATCACCAGTCAACTTATACGTTATGGAATATGGTGACTTTATTAACTTTATGGATAAAATGAGTGCATATCCATGGATTACCCAAAACTTTCAAAAGGTTCAAATGTTACCTAAAGACTTTATTAACACAAAAGATTTAGAGGACGTTAAAACAAGTGAAAATATTACTGGGTTAAAAACCTTAAAACAAGGTGGAAAATCAAAAGAATGGAGTTTAAACGATTTATCATTAAGTTTCACAAAGCTTCAAGAGATGATGTTATCTAAAAAAGATGAATTTAAACATATGATACGTAATGAGTATATGACGATTGAGTTTTATGACTGGAATGGTAATACAATGTTACTAGACGCTGGCAAAATTTCACAAAAAACAGGTGTTAAGTTACGTACAAAATCAATCATTGGTTATCATAATGAAGTTCGAGTATATCCAGTAGATTATAACAGTGCAGAAAACGATAGACCAATACTTGCAAAAAATAAAGATATATTAATTGATACAGGTTCATTCTTAAATACAAATATAACATTTAATAGTTTTGCACAAGTACCAATTTTAATCAATAACGGTATTTTAGGACAATCACAACAAGCCAATAGACAGCGAAATGCTGAAAGTCAATTAATTACAAGTCGTATAGATAATGTATTAAATGGTAGCGACCCAAAATCACGTTTTTATGACGCAGTAAGTGTAGCAAGTAATTTAAGTCCGACTGCTTTATTTGGTAAGTTTAATGAAGAATATAATTTCTACAAACAACAACAAGCAGAATATAAAGATTTAGCATTACAACCACCGTCAGTGACTGAATCAGAAATGGGAAACGCATTCCAAATTGCAAACAGTATTAACGGTTTAACGATGAAAATTAGTGTACCGTCACCTAAAGAAATTACATTTTTACAAAAATATTATATGTTGTTTGGTTTTGAAGTGAATGACTATAATTCATTTATTGAACCAATTAACAGTATGACTGTTTGCAATTATTTAAAATGTACAGGTACTTATACTATACGTGACATTGACCCTATGTTAATGGAACAATTAAAAGCAATTTTGGAATCTGGTGTGAGATTTTGGCATAATGACGGTTCAGGAAATCCAATGTTACAGAACCCTTTAAATAATAAATTTAGAGCAGGTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94d0971eac3556fb44c1955f3db8d43ea70040bae78974a23bb81f4f932e6525
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4214
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of the ligand protein of Staphylococcus aureus phage S24-1 Uchiyama,J., Takemura,I., Matsuzaki,S. and Daibata,M. 2014-03-04 — GenBank